RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 NOC3LQ8WTT2 800 aaKnown RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 PRR11Q96HE9 360 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 SERAC1Q96JX3 654 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 AK8Q96MA6 479 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 CCNL2Q96S94 520 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 LLPHQ9BRT6 129 aaKnown RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 DCLK3Q9C098 648 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 NEUROG2Q9H2A3 272 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 TNKS2Q9H2K2 1166 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 PABPC3Q9H361 631 aaKnown RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 MRPL44Q9H9J2 332 aaKnown RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 NMUR1Q9HB89 426 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 CBX8Q9HC52 389 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 CSNK1G1Q9HCP0 422 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 MBNL3Q9NUK0 354 aaKnown RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 AGO1Q9UL18 857 aaKnown RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 TPX2Q9ULW0 747 aaKnown RBP7.14□□□□□ -1.27
ATXN3-236ENST00000556220 MAN2B2Q9Y2E5 1009 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 U3KQE9 123 aa7.14□□□□□ -1.27
ATXN3-236ENST00000556220 C2CD3Q4AC94 2353 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 A0A1B0GVM2 712 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 A0A1W2PNU3 283 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-236ENST00000556220 A0A1W2PQH9 124 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 CLEC18AA5D8T8 446 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 CDRT15L2A8MXV6 281 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 KIAA0391O15091 583 aaKnown RBP7.13□□□□□ -1.27
ATXN3-236ENST00000556220 GP1BAP07359 652 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 DLDP09622 509 aaKnown RBP7.13□□□□□ -1.27
ATXN3-236ENST00000556220 MAPK1P28482 360 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 HLA-FP30511 346 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 CORO1AP31146 461 aaKnown RBP7.13□□□□□ -1.27
ATXN3-236ENST00000556220 CCR10P46092 362 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 MAP3K7CLP57077 242 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 ISXQ2M1V0 245 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 HS1BP3Q53T59 392 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 CLEC18BQ6UXF7 455 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 TADA2BQ86TJ2 420 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 ADIPOR2Q86V24 386 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 IQCHQ86VS3 1027 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 WDR49Q8IV35 697 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 SYCP3Q8IZU3 236 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 CPXM2Q8N436 756 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 ZNF276Q8N554 614 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 CLEC18CQ8NCF0 446 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 OR4C6Q8NH72 309 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 WFIKKN2Q8TEU8 576 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 DDI1Q8WTU0 396 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 LARP4BQ92615 738 aaKnown RBP7.13□□□□□ -1.27
ATXN3-236ENST00000556220 EXTL1Q92935 676 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 GRAMD1AQ96CP6 724 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 TNIP3Q96KP6 325 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 GZF1Q9H116 711 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-236ENST00000556220 ABCG4Q9H172 646 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 OSBPL2Q9H1P3 480 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 RSPH9Q9H1X1 276 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-236ENST00000556220 HSPBP1Q9NZL4 362 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 TBC1D7Q9P0N9 293 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 SEL1LQ9UBV2 794 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 TJP2Q9UDY2 1190 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 SERGEFQ9UGK8 458 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 PPM1HQ9ULR3 514 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 SATB2Q9UPW6 733 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 PCDHGA8Q9Y5G5 932 aa7.13□□□□□ -1.27
ATXN3-236ENST00000556220 CACNA1DQ01668 2161 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 ITPR2Q14571 2701 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 MID1O15344 667 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 MAGEC1O60732 1142 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 RNASEH1O60930 286 aaKnown RBP7.12□□□□□ -1.27
ATXN3-236ENST00000556220 SDC3O75056 442 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 GCNT3O95395 438 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 GJB6O95452 261 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 ATP5BP06576 529 aaKnown RBP7.12□□□□□ -1.27
ATXN3-236ENST00000556220 BMP6P22004 513 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 DGKAP23743 735 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 HOXD9P28356 352 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-236ENST00000556220 ATICP31939 592 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 DUSP3P51452 185 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-236ENST00000556220 HMGN5P82970 282 aaKnown RBP7.12□□□□□ -1.27
ATXN3-236ENST00000556220 OVGP1Q12889 678 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 RILPL1Q5EBL4 403 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 C3orf38Q5JPI3 329 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 USP53Q70EK8 1073 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 CHST9Q7L1S5 443 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 FAM214BQ7L5A3 538 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 GPRIN1Q7Z2K8 1008 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 TMC6Q7Z403 805 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 KIAA0907Q7Z7F0 614 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-236ENST00000556220 SCD5Q86SK9 330 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 CBWD2Q8IUF1 395 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 DENND1CQ8IV53 801 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 FAM217AQ8IXS0 508 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.12□□□□□ -1.27
ATXN3-236ENST00000556220 FAM184AQ8NB25 1140 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 SLC2A14Q8TDB8 520 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 HPS3Q969F9 1004 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 SGF29Q96ES7 293 aa7.12□□□□□ -1.27
ATXN3-236ENST00000556220 HEXIM2Q96MH2 286 aaKnown RBP7.12□□□□□ -1.27
ATXN3-236ENST00000556220 CDK5RAP1Q96SZ6 601 aaKnown RBP7.12□□□□□ -1.27
ATXN3-236ENST00000556220 OMDQ99983 421 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms