RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 SERAC1Q96JX3 654 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 EDEM3Q9BZQ6 932 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 CEP44Q9C0F1 390 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 TTYH3Q9C0H2 523 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 KDM4CQ9H3R0 1056 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 PARVAQ9NVD7 372 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 NEU3Q9UQ49 428 aa18.8■□□□□ 0.6
NEDD1-208ENST00000555806 KCNK3O14649 394 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 CREB3O43889 395 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 SKILP12757 684 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 PSMA2P25787 234 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 EPHB2P29323 1055 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 MAT2AP31153 395 aaKnown RBP18.79■□□□□ 0.6
NEDD1-208ENST00000555806 L1CAMP32004 1257 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 PRKCIP41743 596 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 FAM193AP78312 1265 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 SHC2P98077 582 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 DPY19L3Q6ZPD9 716 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 TMC6Q7Z403 805 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 PRPF39Q86UA1 669 aaKnown RBP18.79■□□□□ 0.6
NEDD1-208ENST00000555806 DNAAF5Q86Y56 855 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 PCDH20Q8N6Y1 951 aaKnown RBP18.79■□□□□ 0.6
NEDD1-208ENST00000555806 TMIEQ8NEW7 156 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 ARHGEF2Q92974 986 aaKnown RBP18.79■□□□□ 0.6
NEDD1-208ENST00000555806 EPAS1Q99814 870 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 MAGEH1Q9H213 219 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 IL36AQ9UHA7 158 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 FZD10Q9ULW2 581 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 HPCAL4Q9UM19 191 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 FCF1Q9Y324 198 aaKnown RBP18.79■□□□□ 0.6
NEDD1-208ENST00000555806 ACTL7AQ9Y615 435 aa18.79■□□□□ 0.6
NEDD1-208ENST00000555806 VILLO15195 856 aa18.78■□□□□ 0.6
NEDD1-208ENST00000555806 CD38P28907 300 aa18.78■□□□□ 0.6
NEDD1-208ENST00000555806 CTSKP43235 329 aa18.78■□□□□ 0.6
NEDD1-208ENST00000555806 AIF1P55008 147 aa18.78■□□□□ 0.6
NEDD1-208ENST00000555806 UBASH3AP57075 661 aa18.78■□□□□ 0.6
NEDD1-208ENST00000555806 OGDHQ02218 1023 aa18.78■□□□□ 0.6
NEDD1-208ENST00000555806 CCDC15Q0P6D6 951 aa18.78■□□□□ 0.6
NEDD1-208ENST00000555806 MAMLD1Q13495 774 aa18.78■□□□□ 0.6
NEDD1-208ENST00000555806 SUZ12Q15022 739 aaKnown RBP18.78■□□□□ 0.6
NEDD1-208ENST00000555806 POLD3Q15054 466 aaPredicted RBP18.78■□□□□ 0.6
NEDD1-208ENST00000555806 TRIP6Q15654 476 aaKnown RBP18.78■□□□□ 0.6
NEDD1-208ENST00000555806 SLC45A4Q5BKX6 768 aa18.78■□□□□ 0.6
NEDD1-208ENST00000555806 ARSIQ5FYB1 569 aa18.78■□□□□ 0.6
NEDD1-208ENST00000555806 KCNT1Q5JUK3 1230 aa18.78■□□□□ 0.6
NEDD1-208ENST00000555806 ARRDC3Q96B67 414 aa18.78■□□□□ 0.6
NEDD1-208ENST00000555806 PPP1R16AQ96I34 528 aa18.78■□□□□ 0.6
NEDD1-208ENST00000555806 TMEM131Q92545 1883 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 C10orf142B7Z368 130 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 H0Y8X5 98 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 DDX3XO00571 662 aaKnown RBP eCLIP18.77■□□□□ 0.63e-6■■■□□ 15.8
NEDD1-208ENST00000555806 LATO43561 262 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 ZNF821O75541 412 aaPredicted RBP18.77■□□□□ 0.6
NEDD1-208ENST00000555806 LEFTY1O75610 366 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 FTLP02792 175 aaPredicted RBP18.77■□□□□ 0.6
NEDD1-208ENST00000555806 WNT1P04628 370 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 GZMAP12544 262 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 CCT8P50990 548 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 GEMIN4P57678 1058 aaKnown RBP18.77■□□□□ 0.6
NEDD1-208ENST00000555806 ZSCAN23Q3MJ62 389 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 TDRD12Q587J7 1177 aaKnown RBP18.77■□□□□ 0.6
NEDD1-208ENST00000555806 CARD16Q5EG05 197 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 FIGNQ5HY92 759 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 PIP5KL1Q5T9C9 394 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 NAPEPLDQ6IQ20 393 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 PLEKHA7Q6IQ23 1121 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 TRIM69Q86WT6 500 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 RYBPQ8N488 228 aaPredicted RBP18.77■□□□□ 0.6
NEDD1-208ENST00000555806 RTL3Q8N8U3 475 aaKnown RBP18.77■□□□□ 0.6
NEDD1-208ENST00000555806 ZNF653Q96CK0 615 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 HEPHQ9BQS7 1158 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 TM6SF2Q9BZW4 377 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 CATSPERBQ9H7T0 1116 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 PREBQ9HCU5 417 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 CNOT8Q9UFF9 292 aaKnown RBP18.77■□□□□ 0.6
NEDD1-208ENST00000555806 PCDHGB2Q9Y5G2 931 aa18.77■□□□□ 0.6
NEDD1-208ENST00000555806 TP53BP1Q12888 1972 aaPredicted RBP18.76■□□□□ 0.59
NEDD1-208ENST00000555806 WNT9AO14904 365 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 FLRT2O43155 660 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 RNGTTO60942 597 aaKnown RBP18.76■□□□□ 0.59
NEDD1-208ENST00000555806 TOP3BO95985 862 aaKnown RBP18.76■□□□□ 0.59
NEDD1-208ENST00000555806 SPINK2P20155 84 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 NUDT1P36639 197 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 CCNHP51946 323 aaPredicted RBP18.76■□□□□ 0.59
NEDD1-208ENST00000555806 TAS2R38P59533 333 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 IL9RQ01113 521 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 ZNF423Q2M1K9 1284 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 SETMARQ53H47 684 aaPredicted RBP18.76■□□□□ 0.59
NEDD1-208ENST00000555806 LEKR1Q6ZMV7 388 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 ERN2Q76MJ5 926 aaKnown RBP18.76■□□□□ 0.59
NEDD1-208ENST00000555806 ZDHHC6Q9H6R6 413 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 GPATCH2LQ9NWQ4 482 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 MYO1AQ9UBC5 1043 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 PCOLCE2Q9UKZ9 415 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 DMTF1Q9Y222 760 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 WASF2Q9Y6W5 498 aa18.76■□□□□ 0.59
NEDD1-208ENST00000555806 CXorf51AA0A1B0GTR3 108 aa18.75■□□□□ 0.59
NEDD1-208ENST00000555806 PCNX2A6NKB5 2137 aa18.75■□□□□ 0.59
NEDD1-208ENST00000555806 RNF103O00237 685 aa18.75■□□□□ 0.59
NEDD1-208ENST00000555806 BUB1O43683 1085 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms