RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 PARP6Q2NL67 630 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 RABGAP1LQ5R372 815 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 PLPP4Q5VZY2 271 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 C14orf80Q86SX3 495 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 TTC7BQ86TV6 843 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 ZNF366Q8N895 744 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 CKAP2Q8WWK9 683 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 FTHL17Q9BXU8 183 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 ADAM7Q9H2U9 754 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 DLGAP2Q9P1A6 1054 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 RABGEF1Q9UJ41 708 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 PSAT1Q9Y617 370 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 NFS1Q9Y697 457 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 SBF2Q86WG5 1849 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 ANKRD33BA6NCL7 494 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 GABRR2P28476 465 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 CYP1B1Q16678 543 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 MORN1Q5T089 497 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 TMEM154Q6P9G4 183 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 STRADAQ7RTN6 431 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 OTOAQ7RTW8 1153 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 ZNF572Q7Z3I7 529 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 ARL14EPQ8N8R7 260 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 USP13Q92995 863 aaPredicted RBP12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 SLC39A8Q9C0K1 460 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 NMUR1Q9HB89 426 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 PCDHB9Q9Y5E1 797 aa12.42□□□□□ -0.42
ARHGEF40-206ENST00000555232 MAST2Q6P0Q8 1798 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 KATNA1O75449 491 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 PFKMP08237 780 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 VAV1P15498 845 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 NQO1P15559 274 aaKnown RBP12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 PBLDP30039 288 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 GP5P40197 560 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 STX1BP61266 288 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 RASA2Q15283 850 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 PPP1R15BQ5SWA1 713 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 TMTC4Q5T4D3 741 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 PTRHD1Q6GMV3 140 aaKnown RBP12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 VSTM1Q6UX27 236 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 ANGPTL8Q6UXH0 198 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 CRYBG2Q8N1P7 616 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 SCG3Q8WXD2 468 aaKnown RBP12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 PAWRQ96IZ0 340 aaKnown RBP12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 GGA2Q9UJY4 613 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 LSM7Q9UK45 103 aaKnown RBP12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 PLA2G4CQ9UP65 541 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 ACOT9Q9Y305 439 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 AAR2Q9Y312 384 aaKnown RBP12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 COL24A1Q17RW2 1714 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 NEMP2A6NFY4 417 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 SRP72O76094 671 aaKnown RBP12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 ASMTLO95671 621 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 ITGA2BP08514 1039 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 SERPINF2P08697 491 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 RENBPP51606 427 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 GEMP55040 296 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 RBBP7Q16576 425 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 TSNAXIP1Q2TAA8 658 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 TBC1D25Q3MII6 688 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 CWF19L1Q69YN2 538 aaKnown RBP12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 HMCESQ96FZ2 354 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 WWP1Q9H0M0 922 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 ZDHHC4Q9NPG8 344 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 CLUHO75153 1309 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 LY75O60449 1722 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 E9PAM4 449 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 CHADO15335 359 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 TAC1P20366 129 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 CTGFP29279 349 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 CLDN10P78369 228 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 INCA1Q0VD86 236 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 TEX44Q53QW1 395 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 ARMC12Q5T9G4 340 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 TXNDC8Q6A555 127 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 NEPROQ6NW34 567 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 SERINC5Q86VE9 423 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 SPATA24Q86W54 205 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 CATSPER2Q96P56 530 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 TBL1YQ9BQ87 522 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.41□□□□□ -0.427e-7■■■□□ 16.3
ARHGEF40-206ENST00000555232 CHCHD3Q9NX63 227 aaKnown RBP12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 FZD10Q9ULW2 581 aa12.41□□□□□ -0.42
ARHGEF40-206ENST00000555232 BRCA2P51587 3418 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 AHCYL1O43865 530 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 FAM189A1O60320 539 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 KRT16P08779 473 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 PTPN3P26045 913 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 ACVRL1P37023 503 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 CYP4F8P98187 520 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 SLC10A7Q0GE19 358 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 BLMHQ13867 455 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 RNF220Q5VTB9 566 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 DET1Q7L5Y6 550 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 KLHL23Q8NBE8 558 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 APOPT1Q96IL0 206 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 TRIM62Q9BVG3 475 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 ALG9Q9H6U8 611 aa12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 WDR55Q9H6Y2 383 aaPredicted RBP12.4□□□□□ -0.42
ARHGEF40-206ENST00000555232 SCUBE2Q9NQ36 999 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms