RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ZBED4O75132 1171 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 SCGB1D1O95968 90 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 CLEC3BP05452 202 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 CD72P21854 359 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 YWHAQP27348 245 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 FMO4P31512 558 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 POLD2P49005 469 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 HARS2P49590 506 aaKnown RBP5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 CLNS1AP54105 237 aaKnown RBP5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 NEXNQ0ZGT2 675 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 EDRF1Q3B7T1 1238 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 FBXO43Q4G163 708 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 ZNF667Q5HYK9 610 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 AAGABQ6PD74 315 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 NEK10Q6ZWH5 1172 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 PRSS45Q7RTY3 260 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 PRIMA1Q86XR5 153 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 FAM185AQ8N0U4 392 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 PLD5Q8N7P1 536 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 ETNPPLQ8TBG4 499 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 CUL5Q93034 780 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 TREX2Q9BQ50 279 aaPredicted RBP5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 SH2D3AQ9BRG2 576 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 TUBB6Q9BUF5 446 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 SCNM1Q9BWG6 230 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 PLEKHA5Q9HAU0 1116 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 PDGFCQ9NRA1 345 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 KLHL13Q9P2N7 655 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 LAMP3Q9UQV4 416 aa5.79□□□□□ -1.48
CKS1BP1-201ENST00000555221 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 PI4KAP2A4QPH2 592 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 FOXO6A8MYZ6 492 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 CCNDBP1O95273 360 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 WNT1P04628 370 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 BDNFP23560 247 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 CTCFP49711 727 aaPredicted RBP5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 CLCNKBP51801 687 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 YWHAZP63104 245 aaKnown RBP5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 SETQ01105 290 aaPredicted RBP5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 MST1RQ04912 1400 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 ERV3-1Q14264 604 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 TBCEQ15813 527 aaPredicted RBP5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 SLC9B1Q4ZJI4 515 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 CEP78Q5JTW2 689 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 GPATCH4Q5T3I0 446 aaKnown RBP5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 B4GALNT4Q76KP1 1039 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 TADA2BQ86TJ2 420 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 DDIASQ8IXT1 998 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 ANKRD52Q8NB46 1076 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 DPF1Q92782 380 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 TIGD1Q96MW7 591 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 CHCHD6Q9BRQ6 235 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 MRIQ9BWK5 157 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 ZNF304Q9HCX3 659 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 DIAPH3Q9NSV4 1193 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 TMEM45AQ9NWC5 275 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 BABAM1Q9NWV8 329 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 NLKQ9UBE8 527 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 UTS2RQ9UKP6 389 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 AGO2Q9UKV8 859 aaKnown RBP5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 SCINQ9Y6U3 715 aa5.78□□□□□ -1.48
CKS1BP1-201ENST00000555221 KIR2DS5A0A0G2JLQ3 304 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 ANKRD18BA2A2Z9 1011 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 TARSL2A2RTX5 802 aaKnown RBP5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 PABPN1LA6NDY0 278 aaKnown RBP5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 TTC36A6NLP5 189 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 KIR2DS3K7RE56 304 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 RNMTO43148 476 aaKnown RBP5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 RNASEH2AO75792 299 aaKnown RBP5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 TMCC1O94876 653 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 GALTP07902 379 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 ATP5F1P24539 256 aaPredicted RBP5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 SLC16A2P36021 539 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 ARSFP54793 590 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 ARF3P61204 181 aaPredicted RBP5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 ARF1P84077 181 aaKnown RBP5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 ID2Q02363 134 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 CYP4A11Q02928 519 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 FOXD4Q12950 439 aaPredicted RBP5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 PDE1CQ14123 709 aaPredicted RBP5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 MIDNQ504T8 468 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 KIAA1614Q5VZ46 1190 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 ZNF793Q6ZN11 406 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 FAM160B2Q86V87 743 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 SLC25A41Q8N5S1 370 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 NGEFQ8N5V2 710 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 DPP10Q8N608 796 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 TMEM170AQ8WVE7 144 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 SIGLEC11Q96RL6 698 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 LBHD1Q9BQE6 289 aaPredicted RBP5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 USP44Q9H0E7 712 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 RANBP17Q9H2T7 1088 aaKnown RBP5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 CXorf56Q9H5V9 222 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 RNF146Q9NTX7 359 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 PCDHGB5Q9Y5G0 923 aa5.77□□□□□ -1.49
CKS1BP1-201ENST00000555221 A0A1W2PQM1 296 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 C17orf102A2RUQ5 167 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 WIPF3A6NGB9 483 aa5.76□□□□□ -1.49
CKS1BP1-201ENST00000555221 NPIPB15A6NHN6 443 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms