RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 NEK5Q6P3R8 708 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 DPY19L3Q6ZPD9 716 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 TFAP2DQ7Z6R9 452 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 HORMAD1Q86X24 394 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 CACTIN-AS1Q8N1I8 211 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 DCAF4L2Q8NA75 395 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 TMEM35BQ8NCS4 154 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 OR7D4Q8NG98 312 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 RFFLQ8WZ73 363 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 VOPP1Q96AW1 172 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 TUBGCP2Q9BSJ2 902 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 C2orf49Q9BVC5 232 aaPredicted RBP12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 RAB6CQ9H0N0 254 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 TNKS2Q9H2K2 1166 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 SYNCQ9H7C4 482 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 KLHL11Q9NVR0 708 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 UCKL1Q9NWZ5 548 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 ACTL7AQ9Y615 435 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 WASF2Q9Y6W5 498 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 LRRK1Q38SD2 2015 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 KALRNO60229 2985 aa12.5□□□□□ -0.41
MTHFD1-207ENST00000554677 COL27A1Q8IZC6 1860 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 ILVBLA1L0T0 632 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 KPNA3O00505 521 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 ENDOD1O94919 500 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 THEGLP0DJG4 465 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 DGKAP23743 735 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 ITPKBP27987 946 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 CLCN6P51797 869 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 INSM1Q01101 510 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 ZNF211Q13398 564 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 ILKQ13418 452 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 FGL2Q14314 439 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 GSE1Q14687 1217 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 DPCR1Q3MIW9 517 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 TMEM259Q4ZIN3 620 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 HSP90AA4PQ58FG1 418 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 FAM102AQ5T9C2 384 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 SEL1L3Q68CR1 1132 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 C22orf39Q6P5X5 142 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 GCNT7Q6ZNI0 430 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 ERN2Q76MJ5 926 aaKnown RBP12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 NOP9Q86U38 636 aaKnown RBP12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 ERICH1Q86X53 443 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 OR13H1Q8NG92 308 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 HAPLN3Q96S86 360 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 MYOCQ99972 504 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 HDAC8Q9BY41 377 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 MAGEB5Q9BZ81 275 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 NRSN2Q9GZP1 204 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 FZD3Q9NPG1 666 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 SAMSN1Q9NSI8 373 aaKnown RBP12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 STAP1Q9ULZ2 295 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 ATMQ13315 3056 aa12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 HELZ2Q9BYK8 2649 aaKnown RBP12.49□□□□□ -0.41
MTHFD1-207ENST00000554677 GCN1Q92616 2671 aaKnown RBP12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 SRGAP2O75044 1071 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 LEFTY1O75610 366 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 PRNPP04156 253 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 MMEP08473 750 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 UCHL3P15374 230 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 ERCC5P28715 1186 aaPredicted RBP12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 OR1E1P30953 314 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 HNF1BP35680 557 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 EIF2S3P41091 472 aaKnown RBP12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 CLDN2P57739 230 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 NOMO3P69849 1222 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 ARF5P84085 180 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 RAPGEF1Q13905 1077 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 C6orf118Q5T5N4 469 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 TAF3Q5VWG9 929 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 LRRC31Q6UY01 552 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 ZNF783Q6ZMS7 281 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 ARCQ7LC44 396 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 ABI3BPQ7Z7G0 1075 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 SLC22A18ASQ8N1D0 253 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 OR4C6Q8NH72 309 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 CPA5Q8WXQ8 436 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 NXPE2Q96DL1 559 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 BMFQ96LC9 184 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 CFAP57Q96MR6 1250 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 CLSTN2Q9H4D0 955 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 GPR27Q9NS67 375 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 NDFIP2Q9NV92 336 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 IL36AQ9UHA7 158 aa12.48□□□□□ -0.41
MTHFD1-207ENST00000554677 UNC13CQ8NB66 2214 aa12.47□□□□□ -0.41
MTHFD1-207ENST00000554677 LY6G6EA0A0G2JKS1 128 aa12.47□□□□□ -0.41
MTHFD1-207ENST00000554677 GOLGA8SH3BPF8 625 aa12.47□□□□□ -0.41
MTHFD1-207ENST00000554677 PIAS2O75928 621 aa12.47□□□□□ -0.41
MTHFD1-207ENST00000554677 HNRNPA2B1P22626 353 aaKnown RBP12.47□□□□□ -0.41
MTHFD1-207ENST00000554677 SERPINH1P50454 418 aaKnown RBP12.47□□□□□ -0.41
MTHFD1-207ENST00000554677 SEMG2Q02383 582 aa12.47□□□□□ -0.41
MTHFD1-207ENST00000554677 SLC20A2Q08357 652 aa12.47□□□□□ -0.41
MTHFD1-207ENST00000554677 TPD52L1Q16890 204 aaPredicted RBP12.47□□□□□ -0.41
MTHFD1-207ENST00000554677 ACBD5Q5T8D3 534 aaPredicted RBP12.47□□□□□ -0.41
MTHFD1-207ENST00000554677 MANEALQ5VSG8 457 aa12.47□□□□□ -0.41
MTHFD1-207ENST00000554677 FAM131BQ86XD5 332 aa12.47□□□□□ -0.41
MTHFD1-207ENST00000554677 FAM114A1Q8IWE2 563 aa12.47□□□□□ -0.41
MTHFD1-207ENST00000554677 DCBLD1Q8N8Z6 715 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms