RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 EIF2DP41214 584 aaKnown RBP7.79□□□□□ -1.16
TDP1-209ENST00000554180 SARNPP82979 210 aaKnown RBP7.79□□□□□ -1.16
TDP1-209ENST00000554180 SLC20A2Q08357 652 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 LMAN2Q12907 356 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 NR1H3Q13133 447 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 HTR4Q13639 388 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 PRPSAP1Q14558 356 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 ZNF235Q14590 738 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 HIF1AQ16665 826 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 FSCBQ5H9T9 825 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 RALGPS1Q5JS13 557 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 BEND6Q5SZJ8 279 aaPredicted RBP7.79□□□□□ -1.16
TDP1-209ENST00000554180 TANGO2Q6ICL3 276 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 TMC3Q7Z5M5 1100 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 KIAA0907Q7Z7F0 614 aaPredicted RBP7.79□□□□□ -1.16
TDP1-209ENST00000554180 RELL1Q8IUW5 271 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 ETFBKMTQ8IXQ9 262 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 YAF2Q8IY57 180 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 AHI1Q8N157 1196 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 PDIK1LQ8N165 341 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 CPA6Q8N4T0 437 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 MREGQ8N565 214 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 CNTD1Q8N815 330 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 WFIKKN2Q8TEU8 576 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 LRRN4Q8WUT4 740 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 BHMTQ93088 406 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 NXPE3Q969Y0 559 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 ASIC4Q96FT7 647 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 ZNF419Q96HQ0 510 aaPredicted RBP7.79□□□□□ -1.16
TDP1-209ENST00000554180 FAM161BQ96MY7 647 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 AGAP3Q96P47 875 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 FCRL5Q96RD9 977 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 CDX2Q99626 313 aaPredicted RBP7.79□□□□□ -1.16
TDP1-209ENST00000554180 HINFPQ9BQA5 517 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 MGME1Q9BQP7 344 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 SPON2Q9BUD6 331 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 POLR1EQ9GZS1 481 aaKnown RBP7.79□□□□□ -1.16
TDP1-209ENST00000554180 SLC25A51Q9H1U9 297 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 ECT2Q9H8V3 914 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 LRRC40Q9H9A6 602 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 ETNK1Q9HBU6 452 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 GLOD4Q9HC38 313 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 XAB2Q9HCS7 855 aaKnown RBP7.79□□□□□ -1.16
TDP1-209ENST00000554180 ABCB8Q9NUT2 735 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 RBM22Q9NW64 420 aaKnown RBP eCLIP7.79□□□□□ -1.16
TDP1-209ENST00000554180 PLK2Q9NYY3 685 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 RSPH14Q9UHP6 348 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 VPS51Q9UID3 782 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 GGA2Q9UJY4 613 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 SLC27A6Q9Y2P4 619 aa7.79□□□□□ -1.16
TDP1-209ENST00000554180 AAR2Q9Y312 384 aaKnown RBP7.79□□□□□ -1.16
TDP1-209ENST00000554180 KIF26AQ9ULI4 1882 aaPredicted RBP7.79□□□□□ -1.16
TDP1-209ENST00000554180 NUP205Q92621 2012 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 E7ESA3 106 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 H3BQ06 376 aaPredicted RBP7.78□□□□□ -1.16
TDP1-209ENST00000554180 MBTPS2O43462 519 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 TMEM63AO94886 807 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 KCNA5P22460 613 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 CD70P32970 193 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 MAGEA3P43357 314 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 MAPK8P45983 427 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 SERPINH1P50454 418 aaKnown RBP7.78□□□□□ -1.16
TDP1-209ENST00000554180 VASPP50552 380 aaPredicted RBP7.78□□□□□ -1.16
TDP1-209ENST00000554180 GEMP55040 296 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 ARL4CP56559 192 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 ARF5P84085 180 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 SLC10A7Q0GE19 358 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 MPP3Q13368 585 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 PREPLQ4J6C6 727 aaPredicted RBP7.78□□□□□ -1.16
TDP1-209ENST00000554180 PITRM1Q5JRX3 1037 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 ARMC3Q5W041 872 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 KCTD11Q693B1 232 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 NAPEPLDQ6IQ20 393 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 PARM1Q6UWI2 310 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 CENPUQ71F23 418 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 LINC00523Q86TU6 105 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 GSPT2Q8IYD1 628 aaKnown RBP7.78□□□□□ -1.16
TDP1-209ENST00000554180 PLCD3Q8N3E9 789 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 MYLIPQ8WY64 445 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 FGF14Q92915 247 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 HLA-CQ95604 372 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 LRRC39Q96DD0 335 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 IMP4Q96G21 291 aaKnown RBP7.78□□□□□ -1.16
TDP1-209ENST00000554180 GUCD1Q96NT3 240 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 SERPINB12Q96P63 405 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 RBM15Q96T37 977 aaKnown RBP eCLIP7.78□□□□□ -1.16
TDP1-209ENST00000554180 KXD1Q9BQD3 176 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 GORASP1Q9BQQ3 440 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 TRMT61BQ9BVS5 477 aaKnown RBP7.78□□□□□ -1.16
TDP1-209ENST00000554180 CINPQ9BW66 212 aaPredicted RBP7.78□□□□□ -1.16
TDP1-209ENST00000554180 CEP41Q9BYV8 373 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 TXLNGYQ9BZA5 131 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 HPS4Q9NQG7 708 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 FAM153AQ9UHL3 310 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 INTS6Q9UL03 887 aaKnown RBP7.78□□□□□ -1.16
TDP1-209ENST00000554180 CLEC4EQ9ULY5 219 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 HS3ST2Q9Y278 367 aa7.78□□□□□ -1.16
TDP1-209ENST00000554180 NYNRINQ9P2P1 1898 aaKnown RBP7.77□□□□□ -1.17
TDP1-209ENST00000554180 GRXCR2A6NFK2 248 aa7.77□□□□□ -1.17
TDP1-209ENST00000554180 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms