RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 TLR4O00206 839 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 KPNA3O00505 521 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 DFNA5O60443 496 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 ZNF821O75541 412 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 MBD3O95983 291 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 PLEKP08567 350 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 KRT3P12035 628 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 ATP1A3P13637 1013 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 ACVRL1P37023 503 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 GRK6P43250 576 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 PTPN9P43378 593 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 CLCN6P51797 869 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 HDAC4P56524 1084 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 GNA12Q03113 381 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 TYRO3Q06418 890 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 ARL13BQ3SXY8 428 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 ARSIQ5FYB1 569 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 FAM72AQ5TYM5 149 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 NAPEPLDQ6IQ20 393 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 FAM72DQ6L9T8 149 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 RETSATQ6NUM9 610 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 RWDD4Q6NW29 188 aaKnown RBP12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 C22orf39Q6P5X5 142 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 ZNF783Q6ZMS7 281 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 TRIM69Q86WT6 500 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 FAM72BQ86X60 149 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 PHF13Q86YI8 300 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 AOPEPQ8N6M6 819 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 CCDC185Q8N715 623 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 TMIEQ8NEW7 156 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 GRIN3AQ8TCU5 1115 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 FAM172AQ8WUF8 416 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 CENPIQ92674 756 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 CCDC114Q96M63 670 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 ELF4Q99607 663 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 AGPAT1Q99943 283 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 OSBPL2Q9H1P3 480 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 GDF3Q9NR23 364 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 NDFIP2Q9NV92 336 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 TPX2Q9ULW0 747 aaKnown RBP12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 CA5BQ9Y2D0 317 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 ACTL7AQ9Y615 435 aa12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 COL5A1P20908 1838 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC6B-204ENST00000554018 TMEM8BA6NDV4 472 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 RNGTTO60942 597 aaKnown RBP12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 PRNPP04156 253 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CALB1P05937 261 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 GPD1P21695 349 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SERPINH1P50454 418 aaKnown RBP12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 DNA2P51530 1060 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 NXPH1P58417 271 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ARF5P84085 180 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 NRG1Q02297 640 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ANO6Q4KMQ2 910 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CCDC157Q569K6 752 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SLC45A4Q5BKX6 768 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 MANEALQ5VSG8 457 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 WDR59Q6PJI9 974 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 DPY19L3Q6ZPD9 716 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 STRADAQ7RTN6 431 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SPATS2Q86XZ4 545 aaKnown RBP12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 MFSD2AQ8NA29 543 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ZCCHC14Q8WYQ9 949 aaKnown RBP12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 KLK6Q92876 244 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SELENOOQ9BVL4 669 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 PREBQ9HCU5 417 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TMEM63CQ9P1W3 806 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 IL36AQ9UHA7 158 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 DNAI1Q9UI46 699 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 FCF1Q9Y324 198 aaKnown RBP12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 WASF2Q9Y6W5 498 aa12.14□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ANKRD36A6QL64 1941 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 LRRK1Q38SD2 2015 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 BPTFQ12830 3046 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 A0A1W2PQU0 124 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SIGLEC16A6NMB1 481 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SLC31A1O15431 190 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TEX33O43247 280 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 TNFSF14O43557 240 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 LEFTY1O75610 366 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 LRIG2O94898 1065 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 DKK1O94907 266 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CD160O95971 181 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 PRLRP16471 622 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 RHOQP17081 205 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 NUDT1P36639 197 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 RECQLP46063 649 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 GSCP56915 257 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SLC20A2Q08357 652 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ZNF284Q2VY69 593 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SETMARQ53H47 684 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 CCNI2Q6ZMN8 369 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ERN2Q76MJ5 926 aaKnown RBP12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 MON1BQ7L1V2 547 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 NLRP14Q86W24 1093 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 MARCH9Q86YJ5 346 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 C3orf20Q8ND61 904 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 SAP25Q8TEE9 199 aa12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 ARHGEF2Q92974 986 aaKnown RBP12.13□□□□□ -0.47
TRAPPC6B-204ENST00000554018 MYOCQ99972 504 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms