RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 KDM7AQ6ZMT4 941 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 Q6ZVU0 165 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 BEND5Q7L4P6 421 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 PACS2Q86VP3 889 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 TC2NQ8N9U0 490 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 EHBP1Q8NDI1 1231 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 LMO3Q8TAP4 145 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 CCDC97Q96F63 343 aaPredicted RBP9.07□□□□□ -0.96
TDP1-208ENST00000553989 KLHDC7BQ96G42 594 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 CCDC114Q96M63 670 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 KREMEN1Q96MU8 473 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 FCRL3Q96P31 734 aaPredicted RBP9.07□□□□□ -0.96
TDP1-208ENST00000553989 NRSN2Q9GZP1 204 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 MUC3BQ9H195 1237 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 THAP9Q9H5L6 903 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 SYNCQ9H7C4 482 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 ERVMER34-1Q9H9K5 563 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 UBE2TQ9NPD8 197 aaPredicted RBP9.07□□□□□ -0.96
TDP1-208ENST00000553989 DYRK4Q9NR20 520 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 MYO1AQ9UBC5 1043 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 LIMA1Q9UHB6 759 aaKnown RBP9.07□□□□□ -0.96
TDP1-208ENST00000553989 CYTH4Q9UIA0 394 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 RWDD2AQ9UIY3 292 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 VANGL2Q9ULK5 521 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 CLCA2Q9UQC9 943 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 DMTF1Q9Y222 760 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 CA5BQ9Y2D0 317 aa9.07□□□□□ -0.96
TDP1-208ENST00000553989 PRAMEF26H0Y7S4 382 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 SLC31A1O15431 190 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 FFAR2O15552 330 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 TLX3O43711 291 aaPredicted RBP9.06□□□□□ -0.96
TDP1-208ENST00000553989 KIF5CO60282 957 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 BRINP1O60477 761 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 HSF2BPO75031 334 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 PRB1P04280 392 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 THEGLP0DJG4 465 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 GGCXP38435 758 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 EIF2S3P41091 472 aaKnown RBP9.06□□□□□ -0.96
TDP1-208ENST00000553989 RXRGP48443 463 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 RPL34P49207 117 aaKnown RBP9.06□□□□□ -0.96
TDP1-208ENST00000553989 GNG11P61952 73 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 CCDC15Q0P6D6 951 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 OVGP1Q12889 678 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 PAK1Q13153 545 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 DLG2Q15700 870 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 ARHGAP44Q17R89 818 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 CDKAL1Q5VV42 579 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 OR6B2Q6IFH4 312 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 TTI2Q6NXR4 508 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 FBXL22Q6P050 247 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 FBXL19Q6PCT2 694 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 IQCHQ86VS3 1027 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 TRIM69Q86WT6 500 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 SPATS2Q86XZ4 545 aaKnown RBP9.06□□□□□ -0.96
TDP1-208ENST00000553989 TMEM139Q8IV31 216 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 PASD1Q8IV76 773 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 DEFB106AQ8N104 65 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 CEP112Q8N8E3 955 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 STK32AQ8WU08 396 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 FRS2Q8WU20 508 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 ZNF606Q8WXB4 792 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 KLK6Q92876 244 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 IQCDQ96DY2 449 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 NOX5Q96PH1 765 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 CALN1Q9BXU9 219 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 SLC4A5Q9BY07 1137 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 PREBQ9HCU5 417 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 ACP6Q9NPH0 428 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 SARDHQ9UL12 918 aa9.06□□□□□ -0.96
TDP1-208ENST00000553989 NYNRINQ9P2P1 1898 aaKnown RBP9.06□□□□□ -0.96
TDP1-208ENST00000553989 KPNA3O00505 521 aaPredicted RBP9.05□□□□□ -0.96
TDP1-208ENST00000553989 MCF2LO15068 1137 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 ALOX15BO15296 676 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 SIGLEC6O43699 453 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 ATP9BO43861 1147 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 RNGTTO60942 597 aaKnown RBP9.05□□□□□ -0.96
TDP1-208ENST00000553989 FGFR1OPO95684 399 aaKnown RBP9.05□□□□□ -0.96
TDP1-208ENST00000553989 IGLV3-25P01717 112 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 RHOCP08134 193 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 ALPPL2P10696 532 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 PRLRP16471 622 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 AKT2P31751 481 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 ACTN2P35609 894 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 PBX1P40424 430 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 RECQLP46063 649 aaPredicted RBP9.05□□□□□ -0.96
TDP1-208ENST00000553989 PLK1P53350 603 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 KRT83P78385 493 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 MTA1Q13330 715 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 AUHQ13825 339 aaKnown RBP9.05□□□□□ -0.96
TDP1-208ENST00000553989 TAF5Q15542 800 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 MEA1Q16626 185 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 ERCC6LQ2NKX8 1250 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 EFHC1Q5JVL4 640 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 TEX35Q5T0J7 233 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 AGBL4Q5VU57 503 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 SFMBT2Q5VUG0 894 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 CXorf57Q6NSI4 855 aaKnown RBP9.05□□□□□ -0.96
TDP1-208ENST00000553989 ENOSF1Q7L5Y1 443 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 TMEM110Q86TL2 294 aa9.05□□□□□ -0.96
TDP1-208ENST00000553989 TRIM59Q8IWR1 403 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms