RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 TRAPPC12Q8WVT3 735 aa2.54□□□□□ -2
SRP54-204ENST00000553923 HDAC2Q92769 488 aaKnown RBP2.54□□□□□ -2
SRP54-204ENST00000553923 PHKBQ93100 1093 aa2.54□□□□□ -2
SRP54-204ENST00000553923 ZNF566Q969W8 418 aa2.54□□□□□ -2
SRP54-204ENST00000553923 LRRC46Q96FV0 321 aa2.54□□□□□ -2
SRP54-204ENST00000553923 TMEM41AQ96HV5 264 aa2.54□□□□□ -2
SRP54-204ENST00000553923 FAM167BQ9BTA0 163 aa2.54□□□□□ -2
SRP54-204ENST00000553923 ABHD14AQ9BUJ0 271 aa2.54□□□□□ -2
SRP54-204ENST00000553923 SORBS1Q9BX66 1292 aaKnown RBP2.54□□□□□ -2
SRP54-204ENST00000553923 PNRC2Q9NPJ4 139 aaKnown RBP2.54□□□□□ -2
SRP54-204ENST00000553923 TCF7L2Q9NQB0 619 aa2.54□□□□□ -2
SRP54-204ENST00000553923 STARD7Q9NQZ5 370 aa2.54□□□□□ -2
SRP54-204ENST00000553923 BLOC1S4Q9NUP1 217 aa2.54□□□□□ -2
SRP54-204ENST00000553923 DONSONQ9NYP3 566 aa2.54□□□□□ -2
SRP54-204ENST00000553923 SLC45A1Q9Y2W3 748 aa2.54□□□□□ -2
SRP54-204ENST00000553923 LMTK3Q96Q04 1460 aa2.53□□□□□ -2
SRP54-204ENST00000553923 CXorf65A6NEN9 183 aa2.53□□□□□ -2
SRP54-204ENST00000553923 DHHO43323 396 aa2.53□□□□□ -2
SRP54-204ENST00000553923 SKAP2O75563 359 aaPredicted RBP2.53□□□□□ -2
SRP54-204ENST00000553923 TIPRLO75663 272 aa2.53□□□□□ -2
SRP54-204ENST00000553923 NFATC1O95644 943 aa2.53□□□□□ -2
SRP54-204ENST00000553923 POLBP06746 335 aa2.53□□□□□ -2
SRP54-204ENST00000553923 XBP1P17861 261 aa2.53□□□□□ -2
SRP54-204ENST00000553923 SLC5A2P31639 672 aa2.53□□□□□ -2
SRP54-204ENST00000553923 ELF1P32519 619 aa2.53□□□□□ -2
SRP54-204ENST00000553923 ADD2P35612 726 aa2.53□□□□□ -2
SRP54-204ENST00000553923 KRT20P35900 424 aa2.53□□□□□ -2
SRP54-204ENST00000553923 GSTM5P46439 218 aa2.53□□□□□ -2
SRP54-204ENST00000553923 VEGFCP49767 419 aa2.53□□□□□ -2
SRP54-204ENST00000553923 EIF5P55010 431 aaKnown RBP2.53□□□□□ -2
SRP54-204ENST00000553923 MPP1Q00013 466 aa2.53□□□□□ -2
SRP54-204ENST00000553923 NSUN2Q08J23 767 aaKnown RBP eCLIP2.53□□□□□ -2
SRP54-204ENST00000553923 PMPCAQ10713 525 aa2.53□□□□□ -2
SRP54-204ENST00000553923 TRAF2Q12933 501 aa2.53□□□□□ -2
SRP54-204ENST00000553923 MYBPC2Q14324 1141 aa2.53□□□□□ -2
SRP54-204ENST00000553923 HNF4GQ14541 408 aa2.53□□□□□ -2
SRP54-204ENST00000553923 PFKFB4Q16877 469 aa2.53□□□□□ -2
SRP54-204ENST00000553923 ARL13BQ3SXY8 428 aa2.53□□□□□ -2
SRP54-204ENST00000553923 ANKRD45Q5TZF3 282 aa2.53□□□□□ -2
SRP54-204ENST00000553923 RETSATQ6NUM9 610 aa2.53□□□□□ -2
SRP54-204ENST00000553923 CYP26C1Q6V0L0 522 aa2.53□□□□□ -2
SRP54-204ENST00000553923 DSTYKQ6XUX3 929 aa2.53□□□□□ -2
SRP54-204ENST00000553923 FAM43BQ6ZT52 329 aaPredicted RBP2.53□□□□□ -2
SRP54-204ENST00000553923 KIAA0408Q6ZU52 694 aa2.53□□□□□ -2
SRP54-204ENST00000553923 TBC1D1Q86TI0 1168 aaPredicted RBP2.53□□□□□ -2
SRP54-204ENST00000553923 TTC30BQ8N4P2 665 aa2.53□□□□□ -2
SRP54-204ENST00000553923 ESX1Q8N693 406 aa2.53□□□□□ -2
SRP54-204ENST00000553923 CCDC150Q8NCX0 1101 aa2.53□□□□□ -2
SRP54-204ENST00000553923 FIZ1Q96SL8 496 aa2.53□□□□□ -2
SRP54-204ENST00000553923 RMDN3Q96TC7 470 aa2.53□□□□□ -2
SRP54-204ENST00000553923 EIF3CQ99613 913 aaKnown RBP2.53□□□□□ -2
SRP54-204ENST00000553923 NUDT16L1Q9BRJ7 211 aaKnown RBP2.53□□□□□ -2
SRP54-204ENST00000553923 POLDIP3Q9BY77 421 aaKnown RBP2.53□□□□□ -2
SRP54-204ENST00000553923 RSPH9Q9H1X1 276 aaPredicted RBP2.53□□□□□ -2
SRP54-204ENST00000553923 RIC8AQ9NPQ8 531 aa2.53□□□□□ -2
SRP54-204ENST00000553923 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.53□□□□□ -2
SRP54-204ENST00000553923 DACT1Q9NYF0 836 aa2.53□□□□□ -2
SRP54-204ENST00000553923 SLC8A2Q9UPR5 921 aa2.53□□□□□ -2
SRP54-204ENST00000553923 RAI2Q9Y5P3 530 aa2.53□□□□□ -2
SRP54-204ENST00000553923 A0A1B0GVC2 190 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 EYA2O00167 538 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 AREL1O15033 823 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 ZSCAN9O15535 394 aaPredicted RBP2.52□□□□□ -2.01
SRP54-204ENST00000553923 BAIAP3O94812 1187 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 SOX30O94993 753 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 LCKP06239 509 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 ATP1A3P13637 1013 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 IDEP14735 1019 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 TSHRP16473 764 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 CAPN3P20807 821 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 MST1P26927 711 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 PDIA3P30101 505 aaKnown RBP2.52□□□□□ -2.01
SRP54-204ENST00000553923 HSPA7P48741 367 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 TUBA1BP68363 451 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 BNC1Q01954 994 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 SLC35G1Q2M3R5 365 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 P3H1Q32P28 736 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 ALDH1L2Q3SY69 923 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 ZACNQ401N2 412 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 FSCBQ5H9T9 825 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 INTS11Q5TA45 600 aaKnown RBP2.52□□□□□ -2.01
SRP54-204ENST00000553923 MRNIPQ6NTE8 343 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 FBXO38Q6PIJ6 1188 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 USP17L6PQ6QN14 398 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 TMCO3Q6UWJ1 677 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 ADGRF3Q8IZF5 1079 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 ATP11CQ8NB49 1132 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 IL17REQ8NFR9 667 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 FAM216AQ8WUB2 273 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 TMED6Q8WW62 240 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 USP13Q92995 863 aaPredicted RBP2.52□□□□□ -2.01
SRP54-204ENST00000553923 GRAMD1AQ96CP6 724 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 ZBTB10Q96DT7 871 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 IGSF21Q96ID5 467 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 PGLYRP2Q96PD5 576 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 SDF4Q9BRK5 362 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 AP1M1Q9BXS5 423 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 MAGEB5Q9BZ81 275 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 B3GNT4Q9C0J1 378 aa2.52□□□□□ -2.01
SRP54-204ENST00000553923 OSBPL5Q9H0X9 879 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms