RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 FBXL12Q9NXK8 326 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 NCDNQ9UBB6 729 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 MBD1Q9UIS9 605 aaPredicted RBP9.52□□□□□ -0.89
CHD8-206ENST00000553870 CYP8B1Q9UNU6 501 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.52□□□□□ -0.89
CHD8-206ENST00000553870 CHD5Q8TDI0 1954 aa9.52□□□□□ -0.89
CHD8-206ENST00000553870 MUC22E2RYF6 1773 aaPredicted RBP9.51□□□□□ -0.89
CHD8-206ENST00000553870 K7ERQ8 282 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 SLC7A4O43246 635 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 SPOPO43791 374 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 BUB1BO60566 1050 aaPredicted RBP9.51□□□□□ -0.89
CHD8-206ENST00000553870 ZNF821O75541 412 aaPredicted RBP9.51□□□□□ -0.89
CHD8-206ENST00000553870 EPN2O95208 641 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 POP4O95707 220 aaKnown RBP9.51□□□□□ -0.89
CHD8-206ENST00000553870 IL1BP01584 269 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 ZFXP17010 805 aaPredicted RBP9.51□□□□□ -0.89
CHD8-206ENST00000553870 COMTP21964 271 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 CHRNA3P32297 505 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 PAPOLAP51003 745 aaKnown RBP9.51□□□□□ -0.89
CHD8-206ENST00000553870 RPL6Q02878 288 aaKnown RBP9.51□□□□□ -0.89
CHD8-206ENST00000553870 IL10RBQ08334 325 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 NSUN2Q08J23 767 aaKnown RBP eCLIP9.51□□□□□ -0.89
CHD8-206ENST00000553870 GRM3Q14832 879 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 PAFAH1B3Q15102 231 aaKnown RBP9.51□□□□□ -0.89
CHD8-206ENST00000553870 ATP13A4Q4VNC1 1196 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 ODF2Q5BJF6 829 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 WDR45BQ5MNZ6 344 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 ZFYVE27Q5T4F4 411 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 SYCP2LQ5T4T6 812 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 C22orf39Q6P5X5 142 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 LINGO4Q6UY18 593 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 Q6ZVU0 165 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 RABEPKQ7Z6M1 372 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 LRRC8AQ8IWT6 810 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 ARHGAP12Q8IWW6 846 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 RNF10Q8N5U6 811 aaKnown RBP9.51□□□□□ -0.89
CHD8-206ENST00000553870 TPCN2Q8NHX9 752 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 KIAA1524Q8TCG1 905 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 HCAR2Q8TDS4 363 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 FAM131CQ96AQ9 280 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 RNF157Q96PX1 679 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 OMDQ99983 421 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 CALN1Q9BXU9 219 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 MAK16Q9BXY0 300 aaKnown RBP9.51□□□□□ -0.89
CHD8-206ENST00000553870 TSGA10Q9BZW7 698 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 SLC6A17Q9H1V8 727 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 UBA2Q9UBT2 640 aaPredicted RBP9.51□□□□□ -0.89
CHD8-206ENST00000553870 IL36AQ9UHA7 158 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 IPO11Q9UI26 975 aaKnown RBP9.51□□□□□ -0.89
CHD8-206ENST00000553870 INVSQ9Y283 1065 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 REXO2Q9Y3B8 237 aaKnown RBP9.51□□□□□ -0.89
CHD8-206ENST00000553870 MFHAS1Q9Y4C4 1052 aa9.51□□□□□ -0.89
CHD8-206ENST00000553870 BCLAF3A2AJT9 711 aaKnown RBP9.5□□□□□ -0.89
CHD8-206ENST00000553870 RCCD1A6NED2 376 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 LRRC72A6NJI9 287 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 METTL12A8MUP2 240 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 DFFAO00273 331 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 MID1O15344 667 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 ZRANB2O95218 330 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHD8-206ENST00000553870 ZNF806P0C7X5 589 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 VAV1P15498 845 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 MX2P20592 715 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 BCKDHBP21953 392 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 HSPA9P38646 679 aaKnown RBP9.5□□□□□ -0.89
CHD8-206ENST00000553870 CSNK1DP48730 415 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 DNA2P51530 1060 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 RENBPP51606 427 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 NAP1L1P55209 391 aaKnown RBP9.5□□□□□ -0.89
CHD8-206ENST00000553870 ZNF33AQ06730 810 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 MYLK3Q32MK0 819 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 LYSMD4Q5XG99 296 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 NEK5Q6P3R8 708 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 DPY19L3Q6ZPD9 716 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 ZNF662Q6ZS27 426 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 BZW1Q7L1Q6 419 aaKnown RBP9.5□□□□□ -0.89
CHD8-206ENST00000553870 DAAM2Q86T65 1068 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 ALYREFQ86V81 257 aaKnown RBP9.5□□□□□ -0.89
CHD8-206ENST00000553870 SYT12Q8IV01 421 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 RCOR2Q8IZ40 523 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 SYCE1Q8N0S2 351 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 BBS5Q8N3I7 341 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 HDDC3Q8N4P3 179 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 FRMD1Q8N878 549 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 ACRBPQ8NEB7 543 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 OR2AP1Q8NGE2 309 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 PCDH19Q8TAB3 1148 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 CEP76Q8TAP6 659 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 PIP4K2CQ8TBX8 421 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 GANCQ8TET4 914 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 NSMCE1Q8WV22 266 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 DNASE2BQ8WZ79 361 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 RAPGEF5Q92565 580 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 FATE1Q969F0 183 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 ERLEC1Q96DZ1 483 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 PPP1R16AQ96I34 528 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 CELF6Q96J87 481 aaKnown RBP9.5□□□□□ -0.89
CHD8-206ENST00000553870 OSBPL1AQ9BXW6 950 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 HDAC8Q9BY41 377 aa9.5□□□□□ -0.89
CHD8-206ENST00000553870 CPEB1Q9BZB8 566 aaKnown RBP9.5□□□□□ -0.89
CHD8-206ENST00000553870 LACRTQ9GZZ8 138 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms