RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 MOCS2O96007 188 aaPredicted RBP12.12□□□□□ -0.47
SRP54-203ENST00000553544 APOEP02649 317 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 GP1BAP07359 652 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 ALPPL2P10696 532 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 RBMS1P29558 406 aaKnown RBP12.12□□□□□ -0.47
SRP54-203ENST00000553544 NOS2P35228 1153 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 DRD3P35462 400 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 SCNN1AP37088 669 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 KLK7P49862 253 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 DUSP3P51452 185 aaPredicted RBP12.12□□□□□ -0.47
SRP54-203ENST00000553544 COPB1P53618 953 aaKnown RBP12.12□□□□□ -0.47
SRP54-203ENST00000553544 JAM2P57087 298 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 MYL5Q02045 173 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 SULT2A1Q06520 285 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 OTUD1Q5VV17 481 aaPredicted RBP12.12□□□□□ -0.47
SRP54-203ENST00000553544 TRIM69Q86WT6 500 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 APCDD1Q8J025 514 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 NT5C3BQ969T7 300 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 SPAG5Q96R06 1193 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 NPY6RQ99463 290 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 EVA1BQ9NVM1 165 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 DDIT4Q9NX09 232 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 DAAM1Q9Y4D1 1078 aa12.12□□□□□ -0.47
SRP54-203ENST00000553544 PLXNA2O75051 1894 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 PYCARD-AS1I3L0S3 204 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 FFAR2O15552 330 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 DAB1O75553 588 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 MMEP08473 750 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 SLC2A3P11169 496 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 TACR2P21452 398 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 CCR1P32246 355 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 SLC12A1Q13621 1099 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 TAF3Q5VWG9 929 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 RAP1GAP2Q684P5 730 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 ZNF677Q86XU0 584 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 LGI2Q8N0V4 545 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 ATP6V0D2Q8N8Y2 350 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 FAM131CQ96AQ9 280 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 GRAMD1AQ96CP6 724 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 C18orf8Q96DM3 657 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 VCPIP1Q96JH7 1222 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 SLC46A1Q96NT5 459 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 PPP1R9BQ96SB3 815 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 FAM204AQ9H8W3 233 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 USP29Q9HBJ7 922 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 UCKL1Q9NWZ5 548 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 RRN3Q9NYV6 651 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 NOCTQ9UK39 431 aaKnown RBP12.11□□□□□ -0.47
SRP54-203ENST00000553544 SSUH2Q9Y2M2 353 aa12.11□□□□□ -0.47
SRP54-203ENST00000553544 A0A1B0GVM2 712 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 LGALS16A8MUM7 142 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 K7ENP7 123 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 LSM8O95777 96 aaKnown RBP12.1□□□□□ -0.47
SRP54-203ENST00000553544 CYP1A1P04798 512 aaPredicted RBP12.1□□□□□ -0.47
SRP54-203ENST00000553544 TPM2P07951 284 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 THEGLP0DJG4 465 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 SOX5P35711 763 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 CSRP3P50461 194 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 POLR2FP61218 127 aaKnown RBP12.1□□□□□ -0.47
SRP54-203ENST00000553544 NOMO3P69849 1222 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 TYRO3Q06418 890 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 CCDC15Q0P6D6 951 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 CNTN1Q12860 1018 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 POM121L1PQ3SYA9 428 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 C5orf22Q49AR2 442 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 ACCSLQ4AC99 568 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 FKBP15Q5T1M5 1219 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 INO80CQ6PI98 192 aaPredicted RBP12.1□□□□□ -0.47
SRP54-203ENST00000553544 IGF2-ASQ6U949 168 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 CHSY1Q86X52 802 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 XYLT1Q86Y38 959 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 MAPK15Q8TD08 544 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 OR8D1Q8WZ84 308 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 PGAP3Q96FM1 320 aaPredicted RBP12.1□□□□□ -0.47
SRP54-203ENST00000553544 APOLD1Q96LR9 279 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 ERGIC2Q96RQ1 377 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 DUSP23Q9BVJ7 150 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 NAT10Q9H0A0 1025 aaKnown RBP12.1□□□□□ -0.47
SRP54-203ENST00000553544 PDCL3Q9H2J4 239 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 SYNCQ9H7C4 482 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 PREBQ9HCU5 417 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 NLRC4Q9NPP4 1024 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 ASCL3Q9NQ33 180 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 FAM207AQ9NSI2 230 aaPredicted RBP12.1□□□□□ -0.47
SRP54-203ENST00000553544 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.1□□□□□ -0.47
SRP54-203ENST00000553544 NLGN3Q9NZ94 848 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 SLC12A6Q9UHW9 1150 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 TMEM59LQ9UK28 342 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 SARDHQ9UL12 918 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 PPM1HQ9ULR3 514 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 CA5BQ9Y2D0 317 aa12.1□□□□□ -0.47
SRP54-203ENST00000553544 SYNJ2BP-COX16A0A087WUM0 186 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 C1QTNF3-AMACRE9PGA6 284 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 F5H5T6 163 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 I6L893 689 aaPredicted RBP12.09□□□□□ -0.47
SRP54-203ENST00000553544 M0QYT0 321 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 SCAMP1O15126 338 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 SLC31A1O15431 190 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 PIAS2O75928 621 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 GFPT2O94808 682 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms