RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 RNASEH2AO75792 299 aaKnown RBP19.67■□□□□ 0.74
PTCH1-227ENST00000553256 TPM3P06753 285 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 CHRNA3P32297 505 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 ETFBP38117 255 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 YBEYP58557 167 aaPredicted RBP19.67■□□□□ 0.74
PTCH1-227ENST00000553256 SLC25A11Q02978 314 aaKnown RBP19.67■□□□□ 0.74
PTCH1-227ENST00000553256 GFPT1Q06210 699 aaPredicted RBP19.67■□□□□ 0.74
PTCH1-227ENST00000553256 CNTN1Q12860 1018 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 SLC18A3Q16572 532 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 PIP5KL1Q5T9C9 394 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 TXNRD3NBQ6F5E7 133 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 PCDH20Q8N6Y1 951 aaKnown RBP19.67■□□□□ 0.74
PTCH1-227ENST00000553256 OR2T34Q8NGX1 318 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 ARRDC3Q96B67 414 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 EPAS1Q99814 870 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 NUSAP1Q9BXS6 441 aaKnown RBP19.67■□□□□ 0.74
PTCH1-227ENST00000553256 PDFQ9HBH1 243 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 ABHD10Q9NUJ1 306 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 DNAAF2Q9NVR5 837 aaKnown RBP19.67■□□□□ 0.74
PTCH1-227ENST00000553256 PCSK1NQ9UHG2 260 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 NCKAP1Q9Y2A7 1128 aa19.67■□□□□ 0.74
PTCH1-227ENST00000553256 FCF1Q9Y324 198 aaKnown RBP19.67■□□□□ 0.74
PTCH1-227ENST00000553256 MEI4A8MW99 385 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 UPK3BL1B0FP48 263 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 UPK3BL2E5RIL1 263 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 BCAT2O15382 392 aaPredicted RBP19.66■□□□□ 0.74
PTCH1-227ENST00000553256 FGF10O15520 208 aaPredicted RBP19.66■□□□□ 0.74
PTCH1-227ENST00000553256 CREB3O43889 395 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 CFIP05156 583 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 CD27P26842 260 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 HCAR3P49019 387 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 CCR5P51681 352 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 SERINC3Q13530 473 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 DPYSQ14117 519 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 POLD3Q15054 466 aaPredicted RBP19.66■□□□□ 0.74
PTCH1-227ENST00000553256 DPYSL2Q16555 572 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 CCDC122Q5T0U0 273 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 VPS36Q86VN1 386 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 ARHGAP12Q8IWW6 846 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 RGL4Q8IZJ4 473 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 FAM71BQ8TC56 605 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 HMCESQ96FZ2 354 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 BTBD6Q96KE9 485 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 CHP1Q99653 195 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 PACSIN1Q9BY11 444 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 TNKS2Q9H2K2 1166 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 KDM4CQ9H3R0 1056 aa19.66■□□□□ 0.74
PTCH1-227ENST00000553256 ADAMTS9Q9P2N4 1935 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 A0A1W2PPC4 97 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 RASA4BC9J798 803 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 WNT9AO14904 365 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 RASA4O43374 803 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 PPP2CBP62714 309 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 PPP2CAP67775 309 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 SFSWAPQ12872 951 aaKnown RBP19.65■□□□□ 0.74
PTCH1-227ENST00000553256 GRIK2Q13002 908 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 FAM46CQ5VWP2 391 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 IL31Q6EBC2 164 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 RFX8Q6ZV50 586 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 DSG4Q86SJ6 1040 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 PIP4P1Q86T03 277 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 GAS2L3Q86XJ1 694 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 CPNE8Q86YQ8 564 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 NPWQ8N729 165 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 OR2I1PQ8NGU4 316 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 TSC1Q92574 1164 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 OMDQ99983 421 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 NUP85Q9BW27 656 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 DHX35Q9H5Z1 703 aaKnown RBP19.65■□□□□ 0.74
PTCH1-227ENST00000553256 TM9SF3Q9HD45 589 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 CWC15Q9P013 229 aaKnown RBP19.65■□□□□ 0.74
PTCH1-227ENST00000553256 SPEGQ15772 3267 aa19.65■□□□□ 0.74
PTCH1-227ENST00000553256 RNF8O76064 485 aa19.64■□□□□ 0.73
PTCH1-227ENST00000553256 GNSP15586 552 aa19.64■□□□□ 0.73
PTCH1-227ENST00000553256 ARSEP51690 589 aa19.64■□□□□ 0.73
PTCH1-227ENST00000553256 ADKP55263 362 aaKnown RBP19.64■□□□□ 0.73
PTCH1-227ENST00000553256 FOXK2Q01167 660 aa19.64■□□□□ 0.73
PTCH1-227ENST00000553256 PIGHQ14442 188 aaPredicted RBP19.64■□□□□ 0.73
PTCH1-227ENST00000553256 PARP15Q460N3 678 aa19.64■□□□□ 0.73
PTCH1-227ENST00000553256 INO80DQ53TQ3 878 aaPredicted RBP19.64■□□□□ 0.73
PTCH1-227ENST00000553256 CARD16Q5EG05 197 aa19.64■□□□□ 0.73
PTCH1-227ENST00000553256 KCNT1Q5JUK3 1230 aa19.64■□□□□ 0.73
PTCH1-227ENST00000553256 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.64■□□□□ 0.73
PTCH1-227ENST00000553256 NCAPGQ9BPX3 1015 aa19.64■□□□□ 0.73
PTCH1-227ENST00000553256 HDAC8Q9BY41 377 aa19.64■□□□□ 0.73
PTCH1-227ENST00000553256 RBSNQ9H1K0 784 aa19.64■□□□□ 0.73
PTCH1-227ENST00000553256 CATSPERBQ9H7T0 1116 aa19.64■□□□□ 0.73
PTCH1-227ENST00000553256 A0A1W2PR77 199 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 LRRC72A6NJI9 287 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 C1QTNF3-AMACRE9PGA6 284 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 PRPSAP2O60256 369 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 LEFTY1O75610 366 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 FSBPO95073 299 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 GSRP00390 522 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 WNT1P04628 370 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 RARAP10276 462 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 CD59P13987 128 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 ERCC2P18074 760 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 IL4RP24394 825 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 MAPK8P45983 427 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms