RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 CCDC142Q17RM4 750 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 TM4SF20Q53R12 229 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 GUSBP11Q6P575 273 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 ASB18Q6ZVZ8 466 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 ADIPOR2Q86V24 386 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 DENND1CQ8IV53 801 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 CCDC13Q8IYE1 715 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 TMEM102Q8N9M5 508 aaPredicted RBP5.34□□□□□ -1.55
CKAP4-203ENST00000553039 ZSWIM2Q8NEG5 633 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 RNF217Q8TC41 542 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 KBTBD7Q8WVZ9 684 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 TNFRSF25Q93038 417 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 KIAA1143Q96AT1 154 aaPredicted RBP5.34□□□□□ -1.55
CKAP4-203ENST00000553039 SMARCD1Q96GM5 515 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 CGRRF1Q99675 332 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 CCDC3Q9BQI4 270 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 CALN1Q9BXU9 219 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 IRX2Q9BZI1 471 aaPredicted RBP5.34□□□□□ -1.55
CKAP4-203ENST00000553039 GSX2Q9BZM3 304 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 ZNF518BQ9C0D4 1074 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 SYNDIG1Q9H7V2 258 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 PARVGQ9HBI0 331 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 TIMMDC1Q9NPL8 285 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 ABCB8Q9NUT2 735 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 SPASTQ9UBP0 616 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 AGO1Q9UL18 857 aaKnown RBP5.34□□□□□ -1.55
CKAP4-203ENST00000553039 ODF2LQ9ULJ1 636 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 CLEC4EQ9ULY5 219 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 EXOC7Q9UPT5 735 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 SCML2Q9UQR0 700 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 SLC5A6Q9Y289 635 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 LOXL2Q9Y4K0 774 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 CYP46A1Q9Y6A2 500 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 U3KQA8 63 aa5.34□□□□□ -1.55
CKAP4-203ENST00000553039 RELNP78509 3460 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 UBE4BO95155 1302 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 A0A096LPE4 126 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 A0A1W2PPZ6 126 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 ANKRD63C9JTQ0 380 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 K7ENM7 598 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 CLDN5O00501 218 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 SLC31A1O15431 190 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 ZW10O43264 779 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 PEX14O75381 377 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 PAGE1O75459 146 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 SASH3O75995 380 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 NEBLO76041 1014 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 MOCS3O95396 460 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 ASMTLO95671 621 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 LDLRP01130 860 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 CSF2P04141 144 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 KRT18P05783 430 aaKnown RBP5.33□□□□□ -1.56
CKAP4-203ENST00000553039 ANXA6P08133 673 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 SRPRAP08240 638 aaKnown RBP5.33□□□□□ -1.56
CKAP4-203ENST00000553039 PLA2G4BP0C869 781 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 WT1P19544 449 aaPredicted RBP5.33□□□□□ -1.56
CKAP4-203ENST00000553039 HLA-FP30511 346 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 CORO1AP31146 461 aaKnown RBP5.33□□□□□ -1.56
CKAP4-203ENST00000553039 CTSOP43234 321 aaPredicted RBP5.33□□□□□ -1.56
CKAP4-203ENST00000553039 TNNC1P63316 161 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 HYAL2Q12891 473 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 ZRSR1Q15695 479 aaKnown RBP5.33□□□□□ -1.56
CKAP4-203ENST00000553039 DEFB109BQ30KR1 87 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 POM121L1PQ3SYA9 428 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 MPP7Q5T2T1 576 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 C9orf64Q5T6V5 341 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 RNF219Q5W0B1 726 aaPredicted RBP5.33□□□□□ -1.56
CKAP4-203ENST00000553039 CEP135Q66GS9 1140 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 NUGGCQ68CJ6 796 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 CRTC1Q6UUV9 634 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 CRELD2Q6UXH1 353 aaPredicted RBP5.33□□□□□ -1.56
CKAP4-203ENST00000553039 Q6ZSR6 202 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 RUFY3Q7L099 469 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 DYMQ7RTS9 669 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 LYSMD3Q7Z3D4 306 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 MCEMP1Q8IX19 187 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 DIS3L2Q8IYB7 885 aaKnown RBP5.33□□□□□ -1.56
CKAP4-203ENST00000553039 ARHGAP18Q8N392 663 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.33□□□□□ -1.56
CKAP4-203ENST00000553039 IGSF22Q8N9C0 903 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 B3GALNT2Q8NCR0 500 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 CCDC112Q8NEF3 446 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 LMX1AQ8TE12 382 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 PTPRN2Q92932 1015 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 NINJ1Q92982 152 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 TTC17Q96AE7 1141 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 CDK5RAP3Q96JB5 506 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 SLC45A3Q96JT2 553 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 TAAR9Q96RI9 348 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 FAM213AQ9BRX8 229 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 ASPSCR1Q9BZE9 553 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 ZCCHC2Q9C0B9 1178 aaKnown RBP5.33□□□□□ -1.56
CKAP4-203ENST00000553039 DNAI2Q9GZS0 605 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 LRRN3Q9H3W5 708 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 ZHX3Q9H4I2 956 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.33□□□□□ -1.56
CKAP4-203ENST00000553039 RBAKQ9NYW8 714 aaPredicted RBP5.33□□□□□ -1.56
CKAP4-203ENST00000553039 CLIC5Q9NZA1 410 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 SERGEFQ9UGK8 458 aa5.33□□□□□ -1.56
CKAP4-203ENST00000553039 GGA2Q9UJY4 613 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms