RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 CASKIN2Q8WXE0 1202 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 OR8D1Q8WZ84 308 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 CELF6Q96J87 481 aaKnown RBP10.84□□□□□ -0.67
PTCH1-225ENST00000551845 ZC3H10Q96K80 434 aaKnown RBP10.84□□□□□ -0.67
PTCH1-225ENST00000551845 CSPG4P5Q96PW8 444 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 FAM129BQ96TA1 746 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 CALN1Q9BXU9 219 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 CEP44Q9C0F1 390 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 SLC6A17Q9H1V8 727 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 RSPH9Q9H1X1 276 aaPredicted RBP10.84□□□□□ -0.67
PTCH1-225ENST00000551845 NOL6Q9H6R4 1146 aaKnown RBP10.84□□□□□ -0.67
PTCH1-225ENST00000551845 DDX56Q9NY93 547 aaKnown RBP10.84□□□□□ -0.67
PTCH1-225ENST00000551845 TFR2Q9UP52 801 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 GPR179Q6PRD1 2367 aa10.84□□□□□ -0.67
PTCH1-225ENST00000551845 SMAD6O43541 496 aaKnown RBP10.83□□□□□ -0.68
PTCH1-225ENST00000551845 GDF9O60383 454 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 BUB1BO60566 1050 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-225ENST00000551845 NDUFS2O75306 463 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 IL1BP01584 269 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 C7P10643 843 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 TNNT1P13805 278 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 CD6P30203 668 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 SLC8A1P32418 973 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 SERPINH1P50454 418 aaKnown RBP10.83□□□□□ -0.68
PTCH1-225ENST00000551845 PAPOLAP51003 745 aaKnown RBP10.83□□□□□ -0.68
PTCH1-225ENST00000551845 TPMTP51580 245 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 ARSEP51690 589 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 SERINC3Q13530 473 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 DPYSQ14117 519 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 CSRP2Q16527 193 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 PLK5Q496M5 336 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 TTC31Q49AM3 519 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-225ENST00000551845 ANKRD20A8PQ5CZ79 823 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 CARD16Q5EG05 197 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 SPDYCQ5MJ68 293 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 N4BP2L1Q5TBK1 243 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-225ENST00000551845 LPCAT2Q7L5N7 544 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 DAAM2Q86T65 1068 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 CPNE8Q86YQ8 564 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 MMAAQ8IVH4 418 aaKnown RBP10.83□□□□□ -0.68
PTCH1-225ENST00000551845 PLPP6Q8IY26 295 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 TPCN2Q8NHX9 752 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 KIAA1524Q8TCG1 905 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 GANCQ8TET4 914 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 ISG20Q96AZ6 181 aaKnown RBP10.83□□□□□ -0.68
PTCH1-225ENST00000551845 HMCESQ96FZ2 354 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 LOXL4Q96JB6 756 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 ZNF670Q9BS34 389 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 LACRTQ9GZZ8 138 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 LRRC19Q9H756 370 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 PPM1HQ9ULR3 514 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 CYP8B1Q9UNU6 501 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.83□□□□□ -0.68
PTCH1-225ENST00000551845 REXO2Q9Y3B8 237 aaKnown RBP10.83□□□□□ -0.68
PTCH1-225ENST00000551845 DUSP10Q9Y6W6 482 aa10.83□□□□□ -0.68
PTCH1-225ENST00000551845 RALGAPA1Q6GYQ0 2036 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 IGHV1OR15-9A0A0B4J2B8 117 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 RCCD1A6NED2 376 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 C1QTNF3-AMACRE9PGA6 284 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 DFFAO00273 331 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 ALOX15BO15296 676 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 CD160O95971 181 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 CD48P09326 243 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 VAV1P15498 845 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 C5AR1P21730 350 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 PMLP29590 882 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 CHRNA3P32297 505 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 SERPINB6P35237 376 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 SNRPD1P62314 119 aaKnown RBP10.82□□□□□ -0.68
PTCH1-225ENST00000551845 RAD51Q06609 339 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 CCDC15Q0P6D6 951 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 MMRN1Q13201 1228 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 DPYSL3Q14195 570 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 CST6Q15828 149 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 AASDHQ4L235 1098 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-225ENST00000551845 AFMIDQ63HM1 303 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 LEKR1Q6ZMV7 388 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 Q6ZVU0 165 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 USP30Q70CQ3 517 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 KBTBD6Q86V97 674 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 LRRC49Q8IUZ0 686 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 RYBPQ8N488 228 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-225ENST00000551845 FAM160A2Q8N612 972 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-225ENST00000551845 PCDH20Q8N6Y1 951 aaKnown RBP10.82□□□□□ -0.68
PTCH1-225ENST00000551845 FRMD1Q8N878 549 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 TMIEQ8NEW7 156 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 OR2A12Q8NGT7 310 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 RAPGEF5Q92565 580 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 TSC1Q92574 1164 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 RNF25Q96BH1 459 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-225ENST00000551845 OMDQ99983 421 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 DESI2Q9BSY9 194 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 KLC2Q9H0B6 622 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 BTBD1Q9H0C5 482 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 DUSP15Q9H1R2 295 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-225ENST00000551845 TNKS2Q9H2K2 1166 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 FBXL12Q9NXK8 326 aa10.82□□□□□ -0.68
PTCH1-225ENST00000551845 WSB2Q9NYS7 404 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-225ENST00000551845 USP36Q9P275 1121 aaKnown RBP10.82□□□□□ -0.68
PTCH1-225ENST00000551845 SALL4Q9UJQ4 1053 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms