RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 NAT10Q9H0A0 1025 aaKnown RBP16.69■□□□□ 0.26
VPS29-207ENST00000549970 DYRK4Q9NR20 520 aa16.69■□□□□ 0.26
VPS29-207ENST00000549970 GDF3Q9NR23 364 aa16.69■□□□□ 0.26
VPS29-207ENST00000549970 NDFIP2Q9NV92 336 aa16.69■□□□□ 0.26
VPS29-207ENST00000549970 ARHGAP20Q9P2F6 1191 aa16.69■□□□□ 0.26
VPS29-207ENST00000549970 ZMIZ1Q9ULJ6 1067 aa16.69■□□□□ 0.26
VPS29-207ENST00000549970 ACTL7AQ9Y615 435 aa16.69■□□□□ 0.26
VPS29-207ENST00000549970 FAM72CH0Y354 149 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 TLR4O00206 839 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 ZMPSTE24O75844 475 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 LRIG2O94898 1065 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 PRNPP04156 253 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 ATXN1LP0C7T5 689 aaKnown RBP16.68■□□□□ 0.26
VPS29-207ENST00000549970 ACVRL1P37023 503 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 SERPINH1P50454 418 aaKnown RBP16.68■□□□□ 0.26
VPS29-207ENST00000549970 DNA2P51530 1060 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 TAS2R38P59533 333 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 NRG1Q02297 640 aaPredicted RBP16.68■□□□□ 0.26
VPS29-207ENST00000549970 INAVAQ3KP66 663 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 ARSIQ5FYB1 569 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 FAM72AQ5TYM5 149 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 FAM72DQ6L9T8 149 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 DNAJC24Q6P3W2 148 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 WDR59Q6PJI9 974 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 DPY19L3Q6ZPD9 716 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 MON1BQ7L1V2 547 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 FAM72BQ86X60 149 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 KDF1Q8NAX2 398 aaPredicted RBP16.68■□□□□ 0.26
VPS29-207ENST00000549970 TMIEQ8NEW7 156 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 CENPIQ92674 756 aaPredicted RBP16.68■□□□□ 0.26
VPS29-207ENST00000549970 TBC1D31Q96DN5 1066 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 OSBPL2Q9H1P3 480 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 PREBQ9HCU5 417 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 TOR4AQ9NXH8 423 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 IL36AQ9UHA7 158 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 DNAI1Q9UI46 699 aa16.68■□□□□ 0.26
VPS29-207ENST00000549970 FCF1Q9Y324 198 aaKnown RBP16.68■□□□□ 0.26
VPS29-207ENST00000549970 FREM2Q5SZK8 3169 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 TMEM8BA6NDV4 472 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 TEX33O43247 280 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 RNGTTO60942 597 aaKnown RBP16.67■□□□□ 0.26
VPS29-207ENST00000549970 ZNF821O75541 412 aaPredicted RBP16.67■□□□□ 0.26
VPS29-207ENST00000549970 LEFTY1O75610 366 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 PLEKP08567 350 aaPredicted RBP16.67■□□□□ 0.26
VPS29-207ENST00000549970 FERP16591 822 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 RHOQP17081 205 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 NUDT1P36639 197 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 MAPKAPK2P49137 400 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 NXPH1P58417 271 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 CCDC15Q0P6D6 951 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 SETMARQ53H47 684 aaPredicted RBP16.67■□□□□ 0.26
VPS29-207ENST00000549970 CCDC157Q569K6 752 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 NLRP14Q86W24 1093 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 MFSD2AQ8NA29 543 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 ZCCHC14Q8WYQ9 949 aaKnown RBP16.67■□□□□ 0.26
VPS29-207ENST00000549970 KLK6Q92876 244 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 MCEEQ96PE7 176 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 MYOCQ99972 504 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 CEP44Q9C0F1 390 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 TMEM248Q9NWD8 314 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 DMTF1Q9Y222 760 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 CA5BQ9Y2D0 317 aa16.67■□□□□ 0.26
VPS29-207ENST00000549970 A0A1W2PQU0 124 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 FAM221BA6H8Z2 402 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 SIGLEC16A6NMB1 481 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 CCP110O43303 1012 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 TNFSF14O43557 240 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 ITGAVP06756 1048 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 CCDC172P0C7W6 258 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 PRLRP16471 622 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 ETFBP38117 255 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 C1QBPQ07021 282 aaKnown RBP16.66■□□□□ 0.26
VPS29-207ENST00000549970 SLC20A2Q08357 652 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 STAT4Q14765 748 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 SHBQ15464 509 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 CAVIN1Q6NZI2 390 aaKnown RBP16.66■□□□□ 0.26
VPS29-207ENST00000549970 SCYL2Q6P3W7 929 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 ERN2Q76MJ5 926 aaKnown RBP16.66■□□□□ 0.26
VPS29-207ENST00000549970 SLFN11Q7Z7L1 901 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 PCDH20Q8N6Y1 951 aaKnown RBP16.66■□□□□ 0.26
VPS29-207ENST00000549970 ARHGEF2Q92974 986 aaKnown RBP16.66■□□□□ 0.26
VPS29-207ENST00000549970 NTAN1Q96AB6 310 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 PPP1R16AQ96I34 528 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 TM6SF2Q9BZW4 377 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 FTSJ1Q9UET6 329 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 NEU3Q9UQ49 428 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 WASF2Q9Y6W5 498 aa16.66■□□□□ 0.26
VPS29-207ENST00000549970 TCRBV5S1A1TA0A578 114 aa16.65■□□□□ 0.26
VPS29-207ENST00000549970 ANKRD62A6NC57 917 aa16.65■□□□□ 0.26
VPS29-207ENST00000549970 PRAMEF26H0Y7S4 382 aa16.65■□□□□ 0.26
VPS29-207ENST00000549970 SLC31A1O15431 190 aa16.65■□□□□ 0.26
VPS29-207ENST00000549970 PCDH8O95206 1070 aa16.65■□□□□ 0.26
VPS29-207ENST00000549970 CD160O95971 181 aa16.65■□□□□ 0.26
VPS29-207ENST00000549970 EPHA8P29322 1005 aaPredicted RBP16.65■□□□□ 0.26
VPS29-207ENST00000549970 ARRB1P49407 418 aaPredicted RBP16.65■□□□□ 0.26
VPS29-207ENST00000549970 CCNHP51946 323 aaPredicted RBP16.65■□□□□ 0.26
VPS29-207ENST00000549970 RPL7AP62424 266 aaKnown RBP16.65■□□□□ 0.26
VPS29-207ENST00000549970 CARD16Q5EG05 197 aa16.65■□□□□ 0.26
VPS29-207ENST00000549970 ACAD10Q6JQN1 1059 aa16.65■□□□□ 0.26
VPS29-207ENST00000549970 LEKR1Q6ZMV7 388 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms