RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CNBD2Q96M20 576 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 C7orf26Q96N11 449 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 KCNK16Q96T55 309 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 ADAM2Q99965 735 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 MMADHCQ9H3L0 296 aaPredicted RBP11.29□□□□□ -0.6
LINC00661-204ENST00000549354 PRDM12Q9H4Q4 367 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 NRDE2Q9H7Z3 1164 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 THAP1Q9NVV9 213 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 CDH9Q9ULB4 789 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 PHF24Q9UPV7 400 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 RNF103O00237 685 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 BEST1O76090 585 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 C1QAP02745 245 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 SERPINA6P08185 405 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 NPR3P17342 541 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 ARL4AP40617 200 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 NUDT2P50583 147 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 MRPS22P82650 360 aaKnown RBP11.29□□□□□ -0.6
LINC00661-204ENST00000549354 PLIN5Q00G26 463 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 ITKQ08881 620 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 CYTH1Q15438 398 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 GEN1Q17RS7 908 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 NOMO2Q5JPE7 1267 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 TMCO4Q5TGY1 634 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 MAVSQ7Z434 540 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 GSDMBQ8TAX9 411 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 SIGLEC10Q96LC7 697 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 GLT1D1Q96MS3 346 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 CATSPER2Q96P56 530 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 SPATA16Q9BXB7 569 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 PDP2Q9P2J9 529 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 RPL26L1Q9UNX3 145 aaKnown RBP11.29□□□□□ -0.6
LINC00661-204ENST00000549354 PTCH2Q9Y6C5 1203 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 SDR42E2A6NKP2 422 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 FAM72CH0Y354 149 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 TK2O00142 265 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 NDC80O14777 642 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 CHADO15335 359 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 EOMESO95936 686 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 LTFP02788 710 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 INHAP05111 366 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 GSTA2P09210 222 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 VCLP18206 1134 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 CPOXP36551 454 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 CBLBQ13191 982 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 CTBP1Q13363 440 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 CCNIQ14094 377 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 PITRM1Q5JRX3 1037 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 RAB41Q5JT25 222 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 TEDDM1Q5T9Z0 273 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 FAM72AQ5TYM5 149 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 FAM72DQ6L9T8 149 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 STRADAQ7RTN6 431 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 RTN4RL1Q86UN2 441 aaPredicted RBP11.28□□□□□ -0.6
LINC00661-204ENST00000549354 PIGZQ86VD9 579 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 FAM72BQ86X60 149 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 ST13P4Q8IZP2 240 aaPredicted RBP11.28□□□□□ -0.6
LINC00661-204ENST00000549354 PKMYT1Q99640 499 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 RTP3Q9BQQ7 232 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 PIF1Q9H611 641 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 CHRAC1Q9NRG0 131 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 IARS2Q9NSE4 1012 aaKnown RBP11.28□□□□□ -0.6
LINC00661-204ENST00000549354 DDX43Q9NXZ2 648 aaKnown RBP11.28□□□□□ -0.6
LINC00661-204ENST00000549354 CDH22Q9UJ99 828 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 RANBP2P49792 3224 aaKnown RBP11.28□□□□□ -0.6
LINC00661-204ENST00000549354 A0A1W2PQ45 241 aaPredicted RBP11.28□□□□□ -0.6
LINC00661-204ENST00000549354 A0A1W2PQY0 241 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 C9IYK1 514 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 DFFAO00273 331 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 ETFBP38117 255 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 MSLNQ13421 630 aaPredicted RBP11.28□□□□□ -0.6
LINC00661-204ENST00000549354 TUSC3Q13454 348 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 MBTPS1Q14703 1052 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 NRF1Q16656 503 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 TIGD5Q53EQ6 642 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 FAM171BQ6P995 826 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 CLEC20AQ6ZU45 233 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 STRA8Q7Z7C7 330 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 EGFL6Q8IUX8 553 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 ZNF781Q8N8C0 355 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 SPATA22Q8NHS9 363 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 EBNA1BP2Q99848 306 aaKnown RBP11.28□□□□□ -0.6
LINC00661-204ENST00000549354 CSNK1G1Q9HCP0 422 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 SAGE1Q9NXZ1 904 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 POMPQ9Y244 141 aa11.28□□□□□ -0.6
LINC00661-204ENST00000549354 PMPCBO75439 489 aa11.27□□□□□ -0.6
LINC00661-204ENST00000549354 VAV1P15498 845 aa11.27□□□□□ -0.6
LINC00661-204ENST00000549354 IDH3AP50213 366 aa11.27□□□□□ -0.6
LINC00661-204ENST00000549354 CDK7P50613 346 aa11.27□□□□□ -0.6
LINC00661-204ENST00000549354 FOXD4Q12950 439 aaPredicted RBP11.27□□□□□ -0.6
LINC00661-204ENST00000549354 SLC9A4Q6AI14 798 aa11.27□□□□□ -0.6
LINC00661-204ENST00000549354 CYP2R1Q6VVX0 501 aa11.27□□□□□ -0.6
LINC00661-204ENST00000549354 PSTKQ8IV42 348 aaKnown RBP11.27□□□□□ -0.6
LINC00661-204ENST00000549354 PCDH20Q8N6Y1 951 aaKnown RBP11.27□□□□□ -0.6
LINC00661-204ENST00000549354 PPP2R3CQ969Q6 453 aa11.27□□□□□ -0.6
LINC00661-204ENST00000549354 ERLEC1Q96DZ1 483 aa11.27□□□□□ -0.6
LINC00661-204ENST00000549354 RPL10LQ96L21 214 aaKnown RBP11.27□□□□□ -0.6
LINC00661-204ENST00000549354 SLC2A13Q96QE2 648 aa11.27□□□□□ -0.6
LINC00661-204ENST00000549354 HMX1Q9NP08 348 aaPredicted RBP11.27□□□□□ -0.6
LINC00661-204ENST00000549354 ANLNQ9NQW6 1124 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms