RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 COPS2P61201 443 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 SIM2Q14190 667 aaPredicted RBP14.74□□□□□ -0.05
DDX54-203ENST00000546869 ODF2Q5BJF6 829 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 ZFYVE27Q5T4F4 411 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 FAM46CQ5VWP2 391 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 SLC36A4Q6YBV0 504 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 Q6ZVU0 165 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 NT5DC3Q86UY8 548 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 KBTBD6Q86V97 674 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 ZNF354CQ86Y25 554 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 STK40Q8N2I9 435 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 FAM131CQ96AQ9 280 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 RBM41Q96IZ5 413 aaKnown RBP14.74□□□□□ -0.05
DDX54-203ENST00000546869 LOXL4Q96JB6 756 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 MAK16Q9BXY0 300 aaKnown RBP14.74□□□□□ -0.05
DDX54-203ENST00000546869 GOLPH3Q9H4A6 298 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 WSB2Q9NYS7 404 aaPredicted RBP14.74□□□□□ -0.05
DDX54-203ENST00000546869 UBA2Q9UBT2 640 aaPredicted RBP14.74□□□□□ -0.05
DDX54-203ENST00000546869 IPO11Q9UI26 975 aaKnown RBP14.74□□□□□ -0.05
DDX54-203ENST00000546869 EFR3BQ9Y2G0 817 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 FANCMQ8IYD8 2048 aa14.74□□□□□ -0.05
DDX54-203ENST00000546869 IGHV1OR15-9A0A0B4J2B8 117 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 MIF4GDA9UHW6 222 aaKnown RBP14.73□□□□□ -0.05
DDX54-203ENST00000546869 J3KR12 359 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 DFFAO00273 331 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 MAFKO60675 156 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 PALMO75781 387 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 LMNAP02545 664 aaKnown RBP14.73□□□□□ -0.05
DDX54-203ENST00000546869 KRT1P04264 644 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 MX2P20592 715 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 CHRNA3P32297 505 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 RECQLP46063 649 aaPredicted RBP14.73□□□□□ -0.05
DDX54-203ENST00000546869 CSNK1DP48730 415 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 SNRPD1P62314 119 aaKnown RBP14.73□□□□□ -0.05
DDX54-203ENST00000546869 ZNF33AQ06730 810 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 NSUN2Q08J23 767 aaKnown RBP eCLIP14.73□□□□□ -0.05
DDX54-203ENST00000546869 GALNT2Q10471 571 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 CYTH1Q15438 398 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 CST6Q15828 149 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 PLK5Q496M5 336 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 TTC31Q49AM3 519 aaPredicted RBP14.73□□□□□ -0.05
DDX54-203ENST00000546869 MFSD7Q6UXD7 560 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 KIAA1324Q6UXG2 1013 aaKnown RBP14.73□□□□□ -0.05
DDX54-203ENST00000546869 DPY19L3Q6ZPD9 716 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 PLD5Q8N7P1 536 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 OR2AP1Q8NGE2 309 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 NKD2Q969F2 451 aaPredicted RBP14.73□□□□□ -0.05
DDX54-203ENST00000546869 RNF25Q96BH1 459 aaPredicted RBP14.73□□□□□ -0.05
DDX54-203ENST00000546869 TSGA13Q96PP4 275 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 HEPHQ9BQS7 1158 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 SLC6A17Q9H1V8 727 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 PABPC3Q9H361 631 aaKnown RBP14.73□□□□□ -0.05
DDX54-203ENST00000546869 FAM86C1Q9NVL1 165 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 KLHL11Q9NVR0 708 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 TRIM10Q9UDY6 481 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 AMFRQ9UKV5 643 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 FCF1Q9Y324 198 aaKnown RBP14.73□□□□□ -0.05
DDX54-203ENST00000546869 MFHAS1Q9Y4C4 1052 aa14.73□□□□□ -0.05
DDX54-203ENST00000546869 RHOBTB1O94844 696 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 TMCC1O94876 653 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 POP4O95707 220 aaKnown RBP14.72□□□□□ -0.05
DDX54-203ENST00000546869 PEX11BO96011 259 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 PRNPP04156 253 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 CCNCP24863 283 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 CD6P30203 668 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 SLC8A1P32418 973 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 PTPN7P35236 360 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 NR2C2P49116 596 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 RWDD2BP57060 319 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 TFDP2Q14188 446 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 PPP2R5EQ16537 467 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 TFDP3Q5H9I0 405 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 SPOCD1Q6ZMY3 1216 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 CEP68Q76N32 757 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 BZW1Q7L1Q6 419 aaKnown RBP14.72□□□□□ -0.05
DDX54-203ENST00000546869 PEX26Q7Z412 305 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 MMAAQ8IVH4 418 aaKnown RBP14.72□□□□□ -0.05
DDX54-203ENST00000546869 TP53INP2Q8IXH6 220 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 CADM4Q8NFZ8 388 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 RLN3Q8WXF3 142 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 KRT35Q92764 455 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 CPEB1Q9BZB8 566 aaKnown RBP14.72□□□□□ -0.05
DDX54-203ENST00000546869 BRD8Q9H0E9 1235 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 PCED1AQ9H1Q7 454 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 DUSP15Q9H1R2 295 aaPredicted RBP14.72□□□□□ -0.05
DDX54-203ENST00000546869 MBD1Q9UIS9 605 aaPredicted RBP14.72□□□□□ -0.05
DDX54-203ENST00000546869 FZD4Q9ULV1 537 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 GUCA1BQ9UMX6 200 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 NCKAP1Q9Y2A7 1128 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 PPP2R2CQ9Y2T4 447 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 ACTL7AQ9Y615 435 aa14.72□□□□□ -0.05
DDX54-203ENST00000546869 C1QTNF3-AMACRE9PGA6 284 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 APOL1O14791 398 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 SLC7A4O43246 635 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 IL1BP01584 269 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 CTSLP07711 333 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 TNNT1P13805 278 aa14.71□□□□□ -0.05
DDX54-203ENST00000546869 HSPA9P38646 679 aaKnown RBP14.71□□□□□ -0.05
DDX54-203ENST00000546869 GARSP41250 739 aaKnown RBP14.71□□□□□ -0.05
DDX54-203ENST00000546869 RENBPP51606 427 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms