RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 LRRC24Q50LG9 513 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 TDRD12Q587J7 1177 aaKnown RBP4.46□□□□□ -1.7
CCDC38-204ENST00000546816 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 PGBD2Q6P3X8 592 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 ATG16L2Q8NAA4 619 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 NEXN-AS1Q8NBZ9 246 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 CEP76Q8TAP6 659 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 KCNJ9Q92806 393 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 FRG2BQ96QU4 278 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 PIGSQ96S52 555 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 CDH22Q9UJ99 828 aa4.46□□□□□ -1.7
CCDC38-204ENST00000546816 A0A0B4J293 547 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 DENND3A2RUS2 1198 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 SAC3D1A6NKF1 404 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 VWA5AO00534 786 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 HSPB6O14558 160 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 SKAP2O75563 359 aaPredicted RBP4.45□□□□□ -1.7
CCDC38-204ENST00000546816 PRSS2P07478 247 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 CHN1P15882 459 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 ZNF12P17014 697 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 GSTM2P28161 218 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 SERPINA4P29622 427 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 AVPR2P30518 371 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 CLCN5P51795 746 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 DLX5P56178 289 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 TNFAIP2Q03169 654 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 EEF1A2Q05639 463 aaKnown RBP4.45□□□□□ -1.7
CCDC38-204ENST00000546816 RPS6KA2Q15349 733 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 PUM3Q15397 648 aaKnown RBP4.45□□□□□ -1.7
CCDC38-204ENST00000546816 ZNF718Q3SXZ3 478 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 GXYLT1Q4G148 440 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 DGAT2L7PQ6IED9 249 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 HEPHL1Q6MZM0 1159 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 C8orf82Q6P1X6 216 aaPredicted RBP4.45□□□□□ -1.7
CCDC38-204ENST00000546816 KLHL17Q6TDP4 642 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 TOGARAM2Q6ZUX3 1019 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 TRIM74Q86UV6 250 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 TRIM73Q86UV7 250 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 CCDC117Q8IWD4 279 aaPredicted RBP4.45□□□□□ -1.7
CCDC38-204ENST00000546816 PTGR2Q8N8N7 351 aaPredicted RBP4.45□□□□□ -1.7
CCDC38-204ENST00000546816 STT3BQ8TCJ2 826 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 HDAC7Q8WUI4 952 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 FAR1Q8WVX9 515 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 CPT1BQ92523 772 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 ZNF333Q96JL9 665 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.45□□□□□ -1.7
CCDC38-204ENST00000546816 KLQ9UEF7 1012 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 OSGIN2Q9Y236 505 aa4.45□□□□□ -1.7
CCDC38-204ENST00000546816 ACKR2O00590 384 aa4.44□□□□□ -1.7
CCDC38-204ENST00000546816 HNRNPRO43390 633 aaKnown RBP4.44□□□□□ -1.7
CCDC38-204ENST00000546816 DDAH2O95865 285 aa4.44□□□□□ -1.7
CCDC38-204ENST00000546816 IFIT2P09913 472 aaKnown RBP4.44□□□□□ -1.7
CCDC38-204ENST00000546816 MYZAPP0CAP1 466 aa4.44□□□□□ -1.7
CCDC38-204ENST00000546816 SETSIPP0DME0 302 aa4.44□□□□□ -1.7
CCDC38-204ENST00000546816 ITGB8P26012 769 aa4.44□□□□□ -1.7
CCDC38-204ENST00000546816 MRGPRG-AS1Q2M3A8 158 aa4.44□□□□□ -1.7
CCDC38-204ENST00000546816 ZNF672Q499Z4 452 aaPredicted RBP4.44□□□□□ -1.7
CCDC38-204ENST00000546816 RRAGAQ7L523 313 aa4.44□□□□□ -1.7
CCDC38-204ENST00000546816 ZDHHC23Q8IYP9 409 aa4.44□□□□□ -1.7
CCDC38-204ENST00000546816 MUC20Q8N307 709 aaPredicted RBP4.44□□□□□ -1.7
CCDC38-204ENST00000546816 C3orf49Q96BT1 292 aa4.44□□□□□ -1.7
CCDC38-204ENST00000546816 HES6Q96HZ4 224 aa4.44□□□□□ -1.7
CCDC38-204ENST00000546816 DDX23Q9BUQ8 820 aaKnown RBP4.44□□□□□ -1.7
CCDC38-204ENST00000546816 C1QTNF4Q9BXJ3 329 aa4.44□□□□□ -1.7
CCDC38-204ENST00000546816 DDX31Q9H8H2 851 aaKnown RBP4.44□□□□□ -1.7
CCDC38-204ENST00000546816 NDUFAF4Q9P032 175 aa4.44□□□□□ -1.7
CCDC38-204ENST00000546816 LRCH1Q9Y2L9 728 aa4.44□□□□□ -1.7
CCDC38-204ENST00000546816 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.43□□□□□ -1.7
CCDC38-204ENST00000546816 C17orf100A8MU93 164 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 SLC16A5O15375 505 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 ACP5P13686 325 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 ARSAP15289 507 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 DDR1Q08345 913 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 SULT6B1Q6IMI4 303 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 CREB3L2Q70SY1 520 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 GALNT7Q86SF2 657 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 SERPINA11Q86U17 422 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 TEX45Q8NA69 505 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 TMEM163Q8TC26 289 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 OTUD7AQ8TE49 926 aaPredicted RBP4.43□□□□□ -1.7
CCDC38-204ENST00000546816 SLC35F5Q8WV83 523 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 RMDN3Q96TC7 470 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 CADM1Q9BY67 442 aaKnown RBP4.43□□□□□ -1.7
CCDC38-204ENST00000546816 CLPBQ9H078 707 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 IL36RNQ9UBH0 155 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 SEL1LQ9UBV2 794 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 KCND3Q9UK17 655 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 BAG5Q9UL15 447 aa4.43□□□□□ -1.7
CCDC38-204ENST00000546816 ABHD14A-ACY1A0A1B0GW23 586 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 C17orf102A2RUQ5 167 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 TMEM247A6NEH6 219 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 RNMTO43148 476 aaKnown RBP4.42□□□□□ -1.7
CCDC38-204ENST00000546816 CLDN7O95471 211 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 ENO3P13929 434 aaPredicted RBP4.42□□□□□ -1.7
CCDC38-204ENST00000546816 HTR3AP46098 478 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 AMTP48728 403 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 CLCNKBP51801 687 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 NUDT6P53370 316 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 CDH12P55289 794 aa4.42□□□□□ -1.7
CCDC38-204ENST00000546816 POU3F1Q03052 451 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms