RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CHRNA4P43681 627 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 RPL5P46777 297 aaKnown RBP14.9□□□□□ -0.02
HOXC11-202ENST00000546378 BCAT1P54687 386 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 LSM3P62310 102 aaKnown RBP14.9□□□□□ -0.02
HOXC11-202ENST00000546378 MYBPC3Q14896 1274 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 METTL7BQ6UX53 244 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 ZBTB49Q6ZSB9 765 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 KCNMB4Q86W47 210 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 TSPAN14Q8NG11 270 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 AFG1LQ8WV93 481 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 THAP11Q96EK4 314 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 PCDH12Q9NPG4 1184 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 EPS15L1Q9UBC2 864 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 CDYLQ9Y232 598 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 COMMD3-BMI1R4GMX3 469 aa14.9□□□□□ -0.02
HOXC11-202ENST00000546378 NR5A2O00482 541 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 AURKAO14965 403 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 ZBTB24O43167 697 aaPredicted RBP14.89□□□□□ -0.03
HOXC11-202ENST00000546378 SF3B1O75533 1304 aaKnown RBP eCLIP14.89□□□□□ -0.03
HOXC11-202ENST00000546378 NCK1P16333 377 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 TPD52P55327 224 aaPredicted RBP14.89□□□□□ -0.03
HOXC11-202ENST00000546378 SLC10A6Q3KNW5 377 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 CATSPER4Q7RTX7 472 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 DGCR14Q96DF8 476 aaKnown RBP14.89□□□□□ -0.03
HOXC11-202ENST00000546378 SLC29A1Q99808 456 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 WARS2Q9UGM6 360 aaKnown RBP14.89□□□□□ -0.03
HOXC11-202ENST00000546378 CDY2AQ9Y6F7 541 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 CDY1Q9Y6F8 540 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 EEF2KO00418 725 aaKnown RBP14.89□□□□□ -0.03
HOXC11-202ENST00000546378 SUPT7LO94864 414 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 MAGP20916 626 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 LAMC2Q13753 1193 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 FAM35AQ86V20 835 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 OSMRQ99650 979 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 ZNF518BQ9C0D4 1074 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 CCDC90BQ9GZT6 254 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 CDH19Q9H159 772 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 SNX25Q9H3E2 840 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 CDC14AQ9UNH5 594 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 CRYL1Q9Y2S2 319 aa14.89□□□□□ -0.03
HOXC11-202ENST00000546378 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.88□□□□□ -0.03
HOXC11-202ENST00000546378 NFKB1P19838 968 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 GP5P40197 560 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 SLC5A3P53794 718 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 MAXP61244 160 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 LSAMPQ13449 338 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 C16orf87Q6PH81 154 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 GPR142Q7Z601 462 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 SIX6OS1Q8N1H7 587 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 UBR7Q8N806 425 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 VPS39Q96JC1 886 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 CNDP1Q96KN2 507 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 PARK7Q99497 189 aaKnown RBP14.88□□□□□ -0.03
HOXC11-202ENST00000546378 FERMT1Q9BQL6 677 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 SLC2A6Q9UGQ3 507 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 EBF1Q9UH73 591 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 DCDC2Q9UHG0 476 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 A0A0C4DFX4 3053 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 E7ENX8 843 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 VILLO15195 856 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 SPAG6O75602 509 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 KCNH1O95259 989 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 ME2P23368 584 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 SPRP35270 261 aaPredicted RBP14.88□□□□□ -0.03
HOXC11-202ENST00000546378 SLC6A3Q01959 620 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 OGFOD2Q6N063 350 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.88□□□□□ -0.03
HOXC11-202ENST00000546378 ADNPQ9H2P0 1102 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 PPCSQ9HAB8 311 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 DDIT4Q9NX09 232 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 CHCHD3Q9NX63 227 aaKnown RBP14.88□□□□□ -0.03
HOXC11-202ENST00000546378 BARX2Q9UMQ3 279 aaPredicted RBP14.88□□□□□ -0.03
HOXC11-202ENST00000546378 PHIPQ8WWQ0 1821 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 DYNC1LI2O43237 492 aaPredicted RBP14.88□□□□□ -0.03
HOXC11-202ENST00000546378 B4GAT1O43505 415 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 VDRP11473 427 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 AOC1P19801 751 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 L1CAMP32004 1257 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 SLC18A1P54219 525 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 ACBD5Q5T8D3 534 aaPredicted RBP14.88□□□□□ -0.03
HOXC11-202ENST00000546378 TTC33Q6PID6 262 aaPredicted RBP14.88□□□□□ -0.03
HOXC11-202ENST00000546378 CXorf38Q8TB03 319 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 LRCH3Q96II8 777 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 ZIC5Q96T25 663 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 PDLIM7Q9NR12 457 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 BTRCQ9Y297 605 aa14.88□□□□□ -0.03
HOXC11-202ENST00000546378 ADGRA2Q96PE1 1338 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 SOCS7O14512 581 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 TOR1BO14657 336 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 CASQ2O14958 399 aaPredicted RBP14.87□□□□□ -0.03
HOXC11-202ENST00000546378 PMM2O15305 246 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 SNNO75324 88 aaPredicted RBP14.87□□□□□ -0.03
HOXC11-202ENST00000546378 TRMUO75648 421 aaKnown RBP14.87□□□□□ -0.03
HOXC11-202ENST00000546378 SLC5A2P31639 672 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 SERPINB9P50453 376 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 EFNA5P52803 228 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 UGT2A3Q6UWM9 527 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 PRR23BQ6ZRT6 265 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 SPPL2CQ8IUH8 684 aa14.87□□□□□ -0.03
HOXC11-202ENST00000546378 DNAJB14Q8TBM8 379 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms