RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 COQ10AQ96MF6 247 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 AIFM2Q9BRQ8 373 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 HTATIP2Q9BUP3 242 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 RANBP17Q9H2T7 1088 aaKnown RBP4.42□□□□□ -1.7
SNHG1-222ENST00000545308 MUC13Q9H3R2 512 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 R3HDMLQ9H3Y0 253 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 EIF2B3Q9NR50 452 aaKnown RBP4.42□□□□□ -1.7
SNHG1-222ENST00000545308 ARHGEF3Q9NR81 526 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 SNX15Q9NRS6 342 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 KCND2Q9NZV8 630 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 HCN3Q9P1Z3 774 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 SEMA5BQ9P283 1151 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 TESQ9UGI8 421 aaKnown RBP4.42□□□□□ -1.7
SNHG1-222ENST00000545308 FZD4Q9ULV1 537 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 SUFUQ9UMX1 484 aa4.42□□□□□ -1.7
SNHG1-222ENST00000545308 EPN1Q9Y6I3 576 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-222ENST00000545308 PRDM15P57071 1507 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-222ENST00000545308 KANK1Q14678 1352 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 LRRIQ1Q96JM4 1722 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 ARHGEF17Q96PE2 2063 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-222ENST00000545308 A0A1W2PQM1 296 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 SYNDIG1LA6NDD5 238 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 AGAP14A8MT82 685 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 H0YIZ8 118 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 PRYO14603 147 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 PER2O15055 1255 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 MPPED1O15442 326 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 SLC3A2P08195 630 aaKnown RBP4.41□□□□□ -1.7
SNHG1-222ENST00000545308 APEHP13798 732 aaKnown RBP4.41□□□□□ -1.7
SNHG1-222ENST00000545308 CD72P21854 359 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 TM4SF1P30408 202 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 CYP2C18P33260 490 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 ARL3P36405 182 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 HADHAP40939 763 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 FOLR3P41439 243 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 STAT6P42226 847 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 MTNR1AP48039 350 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 CREB5Q02930 508 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 ALKBH1Q13686 389 aaKnown RBP4.41□□□□□ -1.7
SNHG1-222ENST00000545308 BYSLQ13895 437 aaKnown RBP4.41□□□□□ -1.7
SNHG1-222ENST00000545308 SLC9B1Q4ZJI4 515 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 CCDC184Q52MB2 194 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 ZNF667Q5HYK9 610 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 ARMC3Q5W041 872 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 TMEM88Q6PEY1 159 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 ZNF551Q7Z340 670 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-222ENST00000545308 SFTPA1Q8IWL2 248 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 VPS52Q8N1B4 723 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 LINC01465Q8N7H1 131 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 PLD5Q8N7P1 536 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 ENDOVQ8N8Q3 282 aaKnown RBP4.41□□□□□ -1.7
SNHG1-222ENST00000545308 EXD3Q8N9H8 876 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 MAFAQ8NHW3 353 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-222ENST00000545308 ETNPPLQ8TBG4 499 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 C2CD4CQ8TF44 421 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 AKAP1Q92667 903 aaKnown RBP eCLIP4.41□□□□□ -1.7
SNHG1-222ENST00000545308 KIF1BPQ96EK5 621 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 FSD1LQ9BXM9 530 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 DIAPH3Q9NSV4 1193 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 SERTAD4Q9NUC0 356 aa4.41□□□□□ -1.7
SNHG1-222ENST00000545308 NKTRP30414 1462 aaKnown RBP4.41□□□□□ -1.7
SNHG1-222ENST00000545308 TMEM2Q9UHN6 1383 aa4.4□□□□□ -1.7
SNHG1-222ENST00000545308 hCG_1807616A0A1W2PRN6 198 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 PIPSLA2A3N6 862 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 C16orf96A6NNT2 1141 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 GTPBP1O00178 669 aaKnown RBP4.4□□□□□ -1.71
SNHG1-222ENST00000545308 LDLRAD4O15165 306 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 P4HA2O15460 535 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 PEX1O43933 1283 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 ELFN1P0C7U0 828 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 CYP4B1P13584 511 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 ATF7P17544 494 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-222ENST00000545308 NDUFS1P28331 727 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 SLC8A1P32418 973 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 RPS6KA3P51812 740 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 KRTAP10-11P60412 298 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 WDR5P61964 334 aaKnown RBP4.4□□□□□ -1.71
SNHG1-222ENST00000545308 POU5F1Q01860 360 aaKnown RBP4.4□□□□□ -1.71
SNHG1-222ENST00000545308 CFHR3Q02985 330 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 GOLGA8FQ08AF8 430 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 ACVR2BQ13705 512 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 GPR162Q16538 588 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 AP5B1Q2VPB7 878 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 GXYLT1Q4G148 440 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 CFAP58Q5T655 872 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 KLHL24Q6TFL4 600 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 IKBIPQ70UQ0 350 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 RTL10Q7L3V2 364 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 RNF144BQ7Z419 303 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 WDR53Q7Z5U6 358 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-222ENST00000545308 GALNT7Q86SF2 657 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 BRSK2Q8IWQ3 736 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 TTC39CQ8N584 583 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 SRFBP1Q8NEF9 429 aaKnown RBP4.4□□□□□ -1.71
SNHG1-222ENST00000545308 ABHD11Q8NFV4 315 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 TNIP2Q8NFZ5 429 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 RAB40AQ8WXH6 277 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 ATP2A3Q93084 1043 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 GPR78Q96P69 363 aa4.4□□□□□ -1.71
SNHG1-222ENST00000545308 PIP5K1AQ99755 562 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms