RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 SARDHQ9UL12 918 aa16.05■□□□□ 0.16
CCDC78-216ENST00000544996 RALGAPA1Q6GYQ0 2036 aa16.04■□□□□ 0.16
CCDC78-216ENST00000544996 MYO1FO00160 1098 aa16.04■□□□□ 0.16
CCDC78-216ENST00000544996 KPNA3O00505 521 aaPredicted RBP16.04■□□□□ 0.16
CCDC78-216ENST00000544996 ARHGAP33O14559 1287 aa16.04■□□□□ 0.16
CCDC78-216ENST00000544996 SLC7A4O43246 635 aa16.04■□□□□ 0.16
CCDC78-216ENST00000544996 CD27P26842 260 aa16.04■□□□□ 0.16
CCDC78-216ENST00000544996 ADKP55263 362 aaKnown RBP16.04■□□□□ 0.16
CCDC78-216ENST00000544996 MAPK8IP2Q13387 824 aaPredicted RBP16.04■□□□□ 0.16
CCDC78-216ENST00000544996 CA9Q16790 459 aa16.04■□□□□ 0.16
CCDC78-216ENST00000544996 POM121L1PQ3SYA9 428 aa16.04■□□□□ 0.16
CCDC78-216ENST00000544996 BOLA3Q53S33 107 aa16.04■□□□□ 0.16
CCDC78-216ENST00000544996 PPP6R3Q5H9R7 873 aaPredicted RBP16.04■□□□□ 0.16
CCDC78-216ENST00000544996 NCEH1Q6PIU2 408 aa16.04■□□□□ 0.16
CCDC78-216ENST00000544996 UMODL1-AS1Q8N2C9 162 aa16.04■□□□□ 0.16
CCDC78-216ENST00000544996 CTNNBL1Q8WYA6 563 aaPredicted RBP16.04■□□□□ 0.16
CCDC78-216ENST00000544996 ISG20Q96AZ6 181 aaKnown RBP16.04■□□□□ 0.16
CCDC78-216ENST00000544996 CCDC42Q96M95 316 aa16.04■□□□□ 0.16
CCDC78-216ENST00000544996 PEBP4Q96S96 227 aa16.04■□□□□ 0.16
CCDC78-216ENST00000544996 IL36AQ9UHA7 158 aa16.04■□□□□ 0.16
CCDC78-216ENST00000544996 TPX2Q9ULW0 747 aaKnown RBP16.04■□□□□ 0.16
CCDC78-216ENST00000544996 TBC1D3DA0A087WVF3 549 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 TBC1D3IA0A087WXS9 549 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 TBC1D3EA0A087X179 549 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 TBC1D3KA0A087X1G2 549 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 TBC1D3FA6NER0 549 aaPredicted RBP16.03■□□□□ 0.16
CCDC78-216ENST00000544996 TBC1D3LB9A6J9 549 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 RASA4BC9J798 803 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 AKR1B15C9JRZ8 316 aaPredicted RBP16.03■□□□□ 0.16
CCDC78-216ENST00000544996 CDX4O14627 284 aaPredicted RBP16.03■□□□□ 0.16
CCDC78-216ENST00000544996 RASA4O43374 803 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 BUB1O43683 1085 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 H2AFZP0C0S5 128 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 TBC1D3HP0C7X1 549 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 DRD3P35462 400 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 AFF3P51826 1226 aaKnown RBP16.03■□□□□ 0.16
CCDC78-216ENST00000544996 ADPRHP54922 357 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 FOXK2Q01167 660 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 CNTN1Q12860 1018 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 TEAD4Q15561 434 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 CARD16Q5EG05 197 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 TBC1D3GQ6DHY5 549 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 TBC1D3CQ6IPX1 549 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 DPY19L3Q6ZPD9 716 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 RFX8Q6ZV50 586 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 H2AFVQ71UI9 128 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 PLPP6Q8IY26 295 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 TBC1D3Q8IZP1 549 aaPredicted RBP16.03■□□□□ 0.16
CCDC78-216ENST00000544996 RYBPQ8N488 228 aaPredicted RBP16.03■□□□□ 0.16
CCDC78-216ENST00000544996 NIPA2Q8N8Q9 360 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 CASKIN2Q8WXE0 1202 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 PPP1R16AQ96I34 528 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 HEPHQ9BQS7 1158 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 ZDHHC5Q9C0B5 715 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 KDM4CQ9H3R0 1056 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 NOL6Q9H6R4 1146 aaKnown RBP16.03■□□□□ 0.16
CCDC78-216ENST00000544996 ZWILCHQ9H900 591 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 CTTNBP2NLQ9P2B4 639 aa16.03■□□□□ 0.16
CCDC78-216ENST00000544996 FCF1Q9Y324 198 aaKnown RBP16.03■□□□□ 0.16
CCDC78-216ENST00000544996 ZNF821O75541 412 aaPredicted RBP16.02■□□□□ 0.16
CCDC78-216ENST00000544996 CTSLP07711 333 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 HCAR3P49019 387 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 CCR5P51681 352 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 NDST2P52849 883 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 METAP1P53582 386 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 SNRPD1P62314 119 aaKnown RBP16.02■□□□□ 0.16
CCDC78-216ENST00000544996 ASTE1Q2TB18 679 aaPredicted RBP16.02■□□□□ 0.16
CCDC78-216ENST00000544996 UAP1L1Q3KQV9 507 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 ARSIQ5FYB1 569 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 CYP4V2Q6ZWL3 525 aaPredicted RBP16.02■□□□□ 0.16
CCDC78-216ENST00000544996 CHST14Q8NCH0 376 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 C1orf216Q8TAB5 229 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 ZNF564Q8TBZ8 553 aaPredicted RBP16.02■□□□□ 0.16
CCDC78-216ENST00000544996 GRIN3AQ8TCU5 1115 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 HSPH1Q92598 858 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 ARHGEF26Q96DR7 871 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 HMCESQ96FZ2 354 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 KCTD15Q96SI1 283 aaPredicted RBP16.02■□□□□ 0.16
CCDC78-216ENST00000544996 NHEJ1Q9H9Q4 299 aaPredicted RBP16.02■□□□□ 0.16
CCDC78-216ENST00000544996 OSGEPQ9NPF4 335 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 FSCN3Q9NQT6 498 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 UVRAGQ9P2Y5 699 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 HECAQ9UBI9 543 aaPredicted RBP16.02■□□□□ 0.16
CCDC78-216ENST00000544996 LCMT1Q9UIC8 334 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 NENFQ9UMX5 172 aa16.02■□□□□ 0.16
CCDC78-216ENST00000544996 DMXL1Q9Y485 3027 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 NUP205Q92621 2012 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 ARHGAP42A6NI28 874 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 H3BRJ5 948 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 PLK4O00444 970 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 TM4SF5O14894 197 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 PLRG1O43660 514 aaKnown RBP16.01■□□□□ 0.15
CCDC78-216ENST00000544996 OPHN1O60890 802 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 LEFTY1O75610 366 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 CD160O95971 181 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 GSRP00390 522 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 IGHV4-34P06331 123 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 ARL4AP40617 200 aa16.01■□□□□ 0.15
CCDC78-216ENST00000544996 SSR1P43307 286 aaKnown RBP16.01■□□□□ 0.15
CCDC78-216ENST00000544996 CCNHP51946 323 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms