RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 FANCLQ9NW38 375 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 TMEM59LQ9UK28 342 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 NOCTQ9UK39 431 aaKnown RBP16.61■□□□□ 0.25
DDX55-212ENST00000544738 OR51B4Q9Y5P0 310 aa16.61■□□□□ 0.25
DDX55-212ENST00000544738 DRGXA6NNA5 263 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 KLK10O43240 276 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 GFPT2O94808 682 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 CYP1A1P04798 512 aaPredicted RBP16.6■□□□□ 0.25
DDX55-212ENST00000544738 RHOCP08134 193 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 SOX5P35711 763 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 FLT3P36888 993 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 GGCXP38435 758 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 ARRB1P49407 418 aaPredicted RBP16.6■□□□□ 0.25
DDX55-212ENST00000544738 CSRP3P50461 194 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 IRAK1P51617 712 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 CDR2Q01850 454 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 DLG2Q15700 870 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 AADATQ8N5Z0 425 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 DCBLD1Q8N8Z6 715 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 OR52K2Q8NGK3 314 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 OR14C36Q8NHC7 312 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 TTC9Q92623 222 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 MED8Q96G25 268 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 ZNF578Q96N58 590 aaPredicted RBP16.6■□□□□ 0.25
DDX55-212ENST00000544738 HAPLN3Q96S86 360 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 KDM4CQ9H3R0 1056 aa16.6■□□□□ 0.25
DDX55-212ENST00000544738 FARP1Q9Y4F1 1045 aaPredicted RBP16.6■□□□□ 0.25
DDX55-212ENST00000544738 C1QTNF3-AMACRE9PGA6 284 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 MCF2LO15068 1137 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 YKT6O15498 198 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 SLC7A4O43246 635 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 CNTN5O94779 1100 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 MT-CO3P00414 261 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 MPOP05164 745 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 VAV1P15498 845 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 CD38P28907 300 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 EPHA8P29322 1005 aaPredicted RBP16.59■□□□□ 0.25
DDX55-212ENST00000544738 STAT1P42224 750 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 NUMBP49757 651 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 JAM2P57087 298 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 MYL5Q02045 173 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 STX1AQ16623 288 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 ALFQ53S48 1182 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 C2CD6Q53TS8 623 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 TRIM72Q6ZMU5 477 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 BNIPLQ7Z465 357 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 ZNF683Q8IZ20 524 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 CACTIN-AS1Q8N1I8 211 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 SH2D3CQ8N5H7 860 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 CCDC114Q96M63 670 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 CFAP57Q96MR6 1250 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 TRIM4Q9C037 500 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 EBF2Q9HAK2 575 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 NLRC4Q9NPP4 1024 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 ANLNQ9NQW6 1124 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 IL17BQ9UHF5 180 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 HS3ST2Q9Y278 367 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 PCDHB1Q9Y5F3 818 aa16.59■□□□□ 0.25
DDX55-212ENST00000544738 IGLV3-10A0A075B6K4 115 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 TBC1D3DA0A087WVF3 549 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 TBC1D3IA0A087WXS9 549 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 TBC1D3EA0A087X179 549 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 TBC1D3KA0A087X1G2 549 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 TBC1D3FA6NER0 549 aaPredicted RBP16.58■□□□□ 0.24
DDX55-212ENST00000544738 C10orf142B7Z368 130 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 TBC1D3LB9A6J9 549 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 I6L893 689 aaPredicted RBP16.58■□□□□ 0.24
DDX55-212ENST00000544738 WNT9AO14904 365 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 ENDOD1O94919 500 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 TBC1D3HP0C7X1 549 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 CDK11BP21127 795 aaKnown RBP16.58■□□□□ 0.24
DDX55-212ENST00000544738 MMP8P22894 467 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 OR1E1P30953 314 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 DRD3P35462 400 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 NUDT1P36639 197 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 KLK7P49862 253 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 COPB1P53618 953 aaKnown RBP16.58■□□□□ 0.24
DDX55-212ENST00000544738 ADPRHP54922 357 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 VAC14Q08AM6 782 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 TBC1D3GQ6DHY5 549 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 TBC1D3CQ6IPX1 549 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.58■□□□□ 0.24
DDX55-212ENST00000544738 ZNF783Q6ZMS7 281 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 TBC1D3Q8IZP1 549 aaPredicted RBP16.58■□□□□ 0.24
DDX55-212ENST00000544738 SLC20A1Q8WUM9 679 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 KCNE4Q8WWG9 221 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 RFFLQ8WZ73 363 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 FAM131CQ96AQ9 280 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 HIC2Q96JB3 615 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 PCMTD1Q96MG8 357 aaPredicted RBP16.58■□□□□ 0.24
DDX55-212ENST00000544738 LIMA1Q9UHB6 759 aaKnown RBP16.58■□□□□ 0.24
DDX55-212ENST00000544738 PPM1HQ9ULR3 514 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 SIK3Q9Y2K2 1263 aa16.58■□□□□ 0.24
DDX55-212ENST00000544738 COL5A1P20908 1838 aaPredicted RBP16.58■□□□□ 0.24
DDX55-212ENST00000544738 BOD1L1Q8NFC6 3051 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 LRRC10BA6NIK2 292 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 LATO43561 262 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 SRGAP2O75044 1071 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 MBD3O95983 291 aa16.57■□□□□ 0.24
DDX55-212ENST00000544738 CLCN6P51797 869 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms