RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 RRAGDQ9NQL2 400 aaPredicted RBP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 DNAJC17Q9NVM6 304 aaKnown RBP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 CYP8B1Q9UNU6 501 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 TFR2Q9UP52 801 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 TLR6Q9Y2C9 796 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 HBS1LQ9Y450 684 aaKnown RBP6.77□□□□□ -1.33
CDCA3-209ENST00000544610 RAD54BQ9Y620 910 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 ATG2BQ96BY7 2078 aa6.77□□□□□ -1.33
CDCA3-209ENST00000544610 CELSR3Q9NYQ7 3312 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 GOLGA6L10A0A0M3HER8 536 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 CTAGE15A4D2H0 777 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 PRRT4C9JH25 899 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 NEDD8-MDP1E9PL57 170 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 GOLGA8SH3BPF8 625 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 GFRA2O00451 464 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 KCNK3O14649 394 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 ZBTB24O43167 697 aaPredicted RBP6.76□□□□□ -1.33
CDCA3-209ENST00000544610 IRAK2O43187 625 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 ICMTO60725 284 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 TJP3O95049 919 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 TRUB2O95900 331 aaKnown RBP6.76□□□□□ -1.33
CDCA3-209ENST00000544610 SYPP08247 313 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 CTAGE8P0CG41 777 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 IRF1P10914 325 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 NCAM1P13591 858 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 TYRP14679 529 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 MIPP30301 263 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 CCR1P32246 355 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 WASP42768 502 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 NR2C2P49116 596 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 HDAC4P56524 1084 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 COG7P83436 770 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 OGDHQ02218 1023 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 TFDP2Q14188 446 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 SUZ12Q15022 739 aaKnown RBP6.76□□□□□ -1.33
CDCA3-209ENST00000544610 CYP1B1Q16678 543 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 DCAF6Q58WW2 860 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 SEL1L2Q5TEA6 688 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 NUGGCQ68CJ6 796 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 SDE2Q6IQ49 451 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 BZW1Q7L1Q6 419 aaKnown RBP6.76□□□□□ -1.33
CDCA3-209ENST00000544610 GPRIN1Q7Z2K8 1008 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 CTAGE6Q86UF2 777 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 PROSER1Q86XN7 944 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 LRRC49Q8IUZ0 686 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 UNC45BQ8IWX7 931 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 CTAGE4Q8IX94 777 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 CHPFQ8IZ52 775 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 DEFB106AQ8N104 65 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 CHCHD4Q8N4Q1 142 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 OR2I1PQ8NGU4 316 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 FAM172AQ8WUF8 416 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.76□□□□□ -1.33
CDCA3-209ENST00000544610 ALG3Q92685 438 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 FOXJ1Q92949 421 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 SLCO2A1Q92959 643 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 FAF2Q96CS3 445 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 ZNF419Q96HQ0 510 aaPredicted RBP6.76□□□□□ -1.33
CDCA3-209ENST00000544610 MRGPRX1Q96LB2 322 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 XPO6Q96QU8 1125 aaKnown RBP6.76□□□□□ -1.33
CDCA3-209ENST00000544610 BBS2Q9BXC9 721 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 KLF16Q9BXK1 252 aaPredicted RBP6.76□□□□□ -1.33
CDCA3-209ENST00000544610 FAM129AQ9BZQ8 928 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 TRIM7Q9C029 511 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 CD93Q9NPY3 652 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 EVA1BQ9NVM1 165 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.76□□□□□ -1.33
CDCA3-209ENST00000544610 OSER1Q9NX31 292 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 ARHGEF38Q9NXL2 777 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 TJP2Q9UDY2 1190 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 SUSD2Q9UGT4 822 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 SLC12A6Q9UHW9 1150 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 PCDHB3Q9Y5E6 796 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 ITPR1Q14643 2758 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 ABCA7Q8IZY2 2146 aa6.76□□□□□ -1.33
CDCA3-209ENST00000544610 CNOT1A5YKK6 2376 aaKnown RBP6.75□□□□□ -1.33
CDCA3-209ENST00000544610 CXorf51AA0A1B0GTR3 108 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 TAF4O00268 1085 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 ENC1O14682 589 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 NDC80O14777 642 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 SH3BP5O60239 455 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 SLU7O95391 586 aaKnown RBP6.75□□□□□ -1.33
CDCA3-209ENST00000544610 TBX18O95935 607 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 IGLV3-27P01718 113 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 CISD3P0C7P0 127 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 CD6P30203 668 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 L1CAMP32004 1257 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 ADRA1BP35368 520 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 ATP5C1P36542 298 aaKnown RBP6.75□□□□□ -1.33
CDCA3-209ENST00000544610 CDKN2BP42772 138 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 FNTAP49354 379 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 DGKGP49619 791 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 ARSEP51690 589 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 INSM1Q01101 510 aaPredicted RBP6.75□□□□□ -1.33
CDCA3-209ENST00000544610 DEUP1Q05D60 604 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 GRIK2Q13002 908 aa6.75□□□□□ -1.33
CDCA3-209ENST00000544610 KLF1Q13351 362 aaPredicted RBP6.75□□□□□ -1.33
CDCA3-209ENST00000544610 TRIP4Q15650 581 aaPredicted RBP6.75□□□□□ -1.33
CDCA3-209ENST00000544610 TRIP6Q15654 476 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms