RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PQLC3Q8N755 202 aa19.49■□□□□ 0.71
DDX55-211ENST00000544429 LRRC57Q8N9N7 239 aa19.49■□□□□ 0.71
DDX55-211ENST00000544429 KCTD6Q8NC69 237 aa19.49■□□□□ 0.71
DDX55-211ENST00000544429 OR8D1Q8WZ84 308 aa19.49■□□□□ 0.71
DDX55-211ENST00000544429 PABPC3Q9H361 631 aaKnown RBP19.49■□□□□ 0.71
DDX55-211ENST00000544429 SARDHQ9UL12 918 aa19.49■□□□□ 0.71
DDX55-211ENST00000544429 CYP8B1Q9UNU6 501 aa19.49■□□□□ 0.71
DDX55-211ENST00000544429 J3KR12 359 aa19.48■□□□□ 0.71
DDX55-211ENST00000544429 PSTPIP1O43586 416 aa19.48■□□□□ 0.71
DDX55-211ENST00000544429 CTSLP07711 333 aa19.48■□□□□ 0.71
DDX55-211ENST00000544429 NCBP2-AS2Q69YL0 99 aa19.48■□□□□ 0.71
DDX55-211ENST00000544429 SLC36A4Q6YBV0 504 aa19.48■□□□□ 0.71
DDX55-211ENST00000544429 PRR23BQ6ZRT6 265 aa19.48■□□□□ 0.71
DDX55-211ENST00000544429 MMAAQ8IVH4 418 aaKnown RBP19.48■□□□□ 0.71
DDX55-211ENST00000544429 MAP7D3Q8IWC1 876 aa19.48■□□□□ 0.71
DDX55-211ENST00000544429 CALN1Q9BXU9 219 aa19.48■□□□□ 0.71
DDX55-211ENST00000544429 SERGEFQ9UGK8 458 aa19.48■□□□□ 0.71
DDX55-211ENST00000544429 FCF1Q9Y324 198 aaKnown RBP19.48■□□□□ 0.71
DDX55-211ENST00000544429 GVINP1Q7Z2Y8 2422 aa19.48■□□□□ 0.71
DDX55-211ENST00000544429 ZNF292O60281 2723 aa19.48■□□□□ 0.71
DDX55-211ENST00000544429 GON4LQ3T8J9 2241 aa19.48■□□□□ 0.71
DDX55-211ENST00000544429 SHROOM3Q8TF72 1996 aa19.48■□□□□ 0.71
DDX55-211ENST00000544429 RALGAPA1Q6GYQ0 2036 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 MID1O15344 667 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 BUB1O43683 1085 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 SPOPO43791 374 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 RNASEH1O60930 286 aaKnown RBP19.47■□□□□ 0.71
DDX55-211ENST00000544429 TMCC1O94876 653 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 PEX11BO96011 259 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 ADH1BP00325 375 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 DNTTP04053 509 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 ACADMP11310 421 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 C5AR1P21730 350 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 CD6P30203 668 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 OXTRP30559 389 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 DRD3P35462 400 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 IL10RBQ08334 325 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 DPY19L3Q6ZPD9 716 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 ARHGAP36Q6ZRI8 547 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 KIAA1328Q86T90 577 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 CACUL1Q86Y37 369 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 TXLNBQ8N3L3 684 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 AADATQ8N5Z0 425 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 NETO2Q8NC67 525 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 TMIEQ8NEW7 156 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 CCDC114Q96M63 670 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 RNF157Q96PX1 679 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 TNKS2Q9H2K2 1166 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 DDX56Q9NY93 547 aaKnown RBP19.47■□□□□ 0.71
DDX55-211ENST00000544429 TRIM10Q9UDY6 481 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 WASF2Q9Y6W5 498 aa19.47■□□□□ 0.71
DDX55-211ENST00000544429 GRID2IPA4D2P6 1211 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 RNF103O00237 685 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 MAFKO60675 156 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 RHOBTB1O94844 696 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 EPN2O95208 641 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 GSRP00390 522 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 CHRNA3P32297 505 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 SLC8A1P32418 973 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 SERPINB6P35237 376 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 METAP1P53582 386 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 KIF5AQ12840 1032 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 CYTH1Q15438 398 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 ELF2Q15723 593 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 LPAL2Q16609 132 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 TTC31Q49AM3 519 aaPredicted RBP19.46■□□□□ 0.71
DDX55-211ENST00000544429 CARD16Q5EG05 197 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 SLC9A4Q6AI14 798 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 LEKR1Q6ZMV7 388 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 ZNF662Q6ZS27 426 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 DSG4Q86SJ6 1040 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 DAAM2Q86T65 1068 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 KATNAL2Q8IYT4 538 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 CHST14Q8NCH0 376 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 TOE1Q96GM8 510 aaKnown RBP19.46■□□□□ 0.71
DDX55-211ENST00000544429 ZNF419Q96HQ0 510 aaPredicted RBP19.46■□□□□ 0.71
DDX55-211ENST00000544429 PDLIM2Q96JY6 352 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 LHX3Q9UBR4 397 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 IPO11Q9UI26 975 aaKnown RBP19.46■□□□□ 0.71
DDX55-211ENST00000544429 RAB23Q9ULC3 237 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 FZD4Q9ULV1 537 aa19.46■□□□□ 0.71
DDX55-211ENST00000544429 LRRD1A4D1F6 860 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 MFSD11O43934 449 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 GFRA3O60609 400 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 RETP07949 1114 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 TGM1P22735 817 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 CTNNA1P35221 906 aaKnown RBP19.45■□□□□ 0.7
DDX55-211ENST00000544429 PSMD8P48556 350 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 MARCKSL1P49006 195 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 CCNHP51946 323 aaPredicted RBP19.45■□□□□ 0.7
DDX55-211ENST00000544429 GALNT2Q10471 571 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 LPCAT2Q7L5N7 544 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 LRRC49Q8IUZ0 686 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 PLD5Q8N7P1 536 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 CADM4Q8NFZ8 388 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 OR2AP1Q8NGE2 309 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 PIP4K2CQ8TBX8 421 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 RUBCNQ92622 972 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 ZNF599Q96NL3 588 aa19.45■□□□□ 0.7
DDX55-211ENST00000544429 PCED1AQ9H1Q7 454 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms