RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 RUVBL2Q9Y230 463 aaKnown RBP16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 CAPN14A8MX76 684 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 J3KR12 359 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 AIM2O14862 343 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 ALDH1A2O94788 518 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 DDHD2O94830 711 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 AHSGP02765 367 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 HNRNPLP14866 589 aaKnown RBP eCLIP16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 PPIDQ08752 370 aaKnown RBP16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 EFEMP1Q12805 493 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 SEMA3BQ13214 749 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 LIMS2Q7Z4I7 341 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 MFSD6LQ8IWD5 586 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 ATPAF2Q8N5M1 289 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 KCTD13Q8WZ19 329 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 SUDS3Q9H7L9 328 aaPredicted RBP16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 DLGAP2Q9P1A6 1054 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 TSR3Q9UJK0 312 aaKnown RBP16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 ZSWIM8A7E2V4 1837 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 PSMG1O95456 288 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 HLA-DQB2P05538 268 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 TCN1P20061 433 aaPredicted RBP16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 C17orf99Q6UX52 265 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 CD300LGQ6UXG3 332 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 HPS6Q86YV9 775 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 SCUBE1Q8IWY4 988 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 PIAS4Q8N2W9 510 aaPredicted RBP16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 SCG3Q8WXD2 468 aaKnown RBP16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 EZH1Q92800 747 aaPredicted RBP16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 TEKT5Q96M29 485 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 CCDC106Q9BWC9 280 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 SENP6Q9GZR1 1112 aaPredicted RBP16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 NT5MQ9NPB1 228 aa16.04■□□□□ 0.16
SNRNP70-203ENST00000544278 RANBP2P49792 3224 aaKnown RBP16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 TGDSO95455 350 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 CDC42EP1Q00587 391 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 RBM20Q5T481 1227 aaKnown RBP16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 PDPK2PQ6A1A2 396 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 ZNF513Q8N8E2 541 aaPredicted RBP16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 NXNL1Q96CM4 212 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 SLC45A3Q96JT2 553 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 MTG1Q9BT17 334 aaPredicted RBP16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 GBA3Q9H227 469 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 IGSF9Q9P2J2 1179 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 LNPEPQ9UIQ6 1025 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 SERPINE1P05121 402 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 ABCE1P61221 599 aaKnown RBP16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 TUBB3Q13509 450 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 PSMD5Q16401 504 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 INTS6LQ5JSJ4 861 aaKnown RBP16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 TMEM154Q6P9G4 183 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 FRMD7Q6ZUT3 714 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 PTAR1Q7Z6K3 402 aaPredicted RBP16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 SCD5Q86SK9 330 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 SPATA2LQ8IUW3 424 aaPredicted RBP16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 RYBPQ8N488 228 aaPredicted RBP16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 KLHDC9Q8NEP7 349 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 USP13Q92995 863 aaPredicted RBP16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 KATNAL1Q9BW62 490 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 TAGLN3Q9UI15 199 aa16.03■□□□□ 0.16
SNRNP70-203ENST00000544278 STX16-NPEPL1H3BU86 382 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 UBTFL6P0CB48 400 aaPredicted RBP16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 PCSK1P29120 753 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 SPRP35270 261 aaPredicted RBP16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 SCNN1BP51168 640 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 LPIN1Q14693 890 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 ALFQ53S48 1182 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 ZNF470Q6ECI4 717 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 TAF2Q6P1X5 1199 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 DEFB107AQ8IZN7 70 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 CFAP52Q8N1V2 620 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 ZNF398Q8TD17 642 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 SLC26A7Q8TE54 656 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 DNAJC9Q8WXX5 260 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 CATSPER2Q96P56 530 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 FSD1LQ9BXM9 530 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 NMRAL1Q9HBL8 299 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 DMAP1Q9NPF5 467 aaPredicted RBP16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 CDH9Q9ULB4 789 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 GOLGA8CPA6NN73 597 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 HAPLN1P10915 354 aaPredicted RBP16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 ODC1P11926 461 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 LIMK2P53671 638 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 CNSTQ6PJW8 725 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 IFNL1Q8IU54 200 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 ARHGAP12Q8IWW6 846 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 FAM156AQ8NDB6 213 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 MYEOVQ96EZ4 313 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 SLC38A7Q9NVC3 462 aa16.02■□□□□ 0.16
SNRNP70-203ENST00000544278 PIGNO95427 931 aa16.02■□□□□ 0.15
SNRNP70-203ENST00000544278 PRSS56P0CW18 603 aa16.02■□□□□ 0.15
SNRNP70-203ENST00000544278 IHHQ14623 411 aa16.02■□□□□ 0.15
SNRNP70-203ENST00000544278 PTPRRQ15256 657 aa16.02■□□□□ 0.15
SNRNP70-203ENST00000544278 METTL23Q86XA0 190 aa16.02■□□□□ 0.15
SNRNP70-203ENST00000544278 RSPH1Q8WYR4 309 aa16.02■□□□□ 0.15
SNRNP70-203ENST00000544278 BHMTQ93088 406 aa16.02■□□□□ 0.15
SNRNP70-203ENST00000544278 PHF21BQ96EK2 531 aa16.02■□□□□ 0.15
SNRNP70-203ENST00000544278 ELMO2Q96JJ3 720 aa16.02■□□□□ 0.15
SNRNP70-203ENST00000544278 EXOC2Q96KP1 924 aa16.02■□□□□ 0.15
SNRNP70-203ENST00000544278 TMEM165Q9HC07 324 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms