RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 WASH4PA8MWX3 477 aa23.74■■□□□ 1.39
CHFR-222ENST00000544093 K7ERQ8 282 aa23.74■■□□□ 1.39
CHFR-222ENST00000544093 SMAD6O43541 496 aaKnown RBP23.74■■□□□ 1.39
CHFR-222ENST00000544093 PLRG1O43660 514 aaKnown RBP23.74■■□□□ 1.39
CHFR-222ENST00000544093 GYPCP04921 128 aa23.74■■□□□ 1.39
CHFR-222ENST00000544093 KCNA4P22459 653 aa23.74■■□□□ 1.39
CHFR-222ENST00000544093 GLDCP23378 1020 aa23.74■■□□□ 1.39
CHFR-222ENST00000544093 ZNF135P52742 658 aaPredicted RBP23.74■■□□□ 1.39
CHFR-222ENST00000544093 RACK1P63244 317 aaKnown RBP23.74■■□□□ 1.39
CHFR-222ENST00000544093 HNRNPDQ14103 355 aaKnown RBP23.74■■□□□ 1.39
CHFR-222ENST00000544093 TRIM14Q14142 442 aa23.74■■□□□ 1.39
CHFR-222ENST00000544093 PSAPL1Q6NUJ1 521 aa23.74■■□□□ 1.39
CHFR-222ENST00000544093 PLPP6Q8IY26 295 aa23.74■■□□□ 1.39
CHFR-222ENST00000544093 XPO4Q9C0E2 1151 aaKnown RBP23.74■■□□□ 1.39
CHFR-222ENST00000544093 TM9SF3Q9HD45 589 aa23.74■■□□□ 1.39
CHFR-222ENST00000544093 NDFIP2Q9NV92 336 aa23.74■■□□□ 1.39
CHFR-222ENST00000544093 IL36AQ9UHA7 158 aa23.74■■□□□ 1.39
CHFR-222ENST00000544093 SARDHQ9UL12 918 aa23.74■■□□□ 1.39
CHFR-222ENST00000544093 TBC1D3DA0A087WVF3 549 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 TBC1D3IA0A087WXS9 549 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 TBC1D3EA0A087X179 549 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 TBC1D3KA0A087X1G2 549 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 TBC1D3FA6NER0 549 aaPredicted RBP23.73■■□□□ 1.39
CHFR-222ENST00000544093 C10orf142B7Z368 130 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 TBC1D3LB9A6J9 549 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 CREB3O43889 395 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 PRPSAP2O60256 369 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 TBC1D3HP0C7X1 549 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 ZNF883P0CG24 379 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 ACVRL1P37023 503 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 PARP15Q460N3 678 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 ERMARDQ5T6L9 678 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 TBC1D3GQ6DHY5 549 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 TBC1D3CQ6IPX1 549 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 TBC1D3Q8IZP1 549 aaPredicted RBP23.73■■□□□ 1.39
CHFR-222ENST00000544093 PYROXD2Q8N2H3 581 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 CASKIN2Q8WXE0 1202 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 PREBQ9HCU5 417 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 AP4E1Q9UPM8 1137 aa23.73■■□□□ 1.39
CHFR-222ENST00000544093 KPNA3O00505 521 aaPredicted RBP23.72■■□□□ 1.39
CHFR-222ENST00000544093 KDELR3O43731 214 aa23.72■■□□□ 1.39
CHFR-222ENST00000544093 GJB3O75712 270 aa23.72■■□□□ 1.39
CHFR-222ENST00000544093 CSNK1EP49674 416 aaKnown RBP23.72■■□□□ 1.39
CHFR-222ENST00000544093 TPI1P60174 286 aa23.72■■□□□ 1.39
CHFR-222ENST00000544093 CNTN1Q12860 1018 aa23.72■■□□□ 1.39
CHFR-222ENST00000544093 CARD16Q5EG05 197 aa23.72■■□□□ 1.39
CHFR-222ENST00000544093 AGBL4Q5VU57 503 aa23.72■■□□□ 1.39
CHFR-222ENST00000544093 SPECC1LQ69YQ0 1117 aa23.72■■□□□ 1.39
CHFR-222ENST00000544093 ADAT2Q7Z6V5 191 aaKnown RBP23.72■■□□□ 1.39
CHFR-222ENST00000544093 LRIG1Q96JA1 1093 aa23.72■■□□□ 1.39
CHFR-222ENST00000544093 ORAI3Q9BRQ5 295 aa23.72■■□□□ 1.39
CHFR-222ENST00000544093 MAGEB5Q9BZ81 275 aa23.72■■□□□ 1.39
CHFR-222ENST00000544093 MYO1AQ9UBC5 1043 aa23.72■■□□□ 1.39
CHFR-222ENST00000544093 LATO43561 262 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 ZNF821O75541 412 aaPredicted RBP23.71■■□□□ 1.39
CHFR-222ENST00000544093 CTSLP07711 333 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 TPM1P09493 284 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 HNRNPH3P31942 346 aaKnown RBP23.71■■□□□ 1.39
CHFR-222ENST00000544093 CASP14P31944 242 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 PCK1P35558 622 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 SLC45A4Q5BKX6 768 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 NEK5Q6P3R8 708 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 DPY19L3Q6ZPD9 716 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 PIP4P1Q86T03 277 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 PRPF39Q86UA1 669 aaKnown RBP23.71■■□□□ 1.39
CHFR-222ENST00000544093 TRIM69Q86WT6 500 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 UMODL1-AS1Q8N2C9 162 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 HEPHQ9BQS7 1158 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 HDAC8Q9BY41 377 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 TNKS2Q9H2K2 1166 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 GAREM1Q9H706 876 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 DMTF1Q9Y222 760 aa23.71■■□□□ 1.39
CHFR-222ENST00000544093 PLXNA2O75051 1894 aa23.7■■□□□ 1.39
CHFR-222ENST00000544093 A0A1B0GVT2 93 aa23.7■■□□□ 1.38
CHFR-222ENST00000544093 PCNX2A6NKB5 2137 aa23.7■■□□□ 1.38
CHFR-222ENST00000544093 VILLO15195 856 aa23.7■■□□□ 1.38
CHFR-222ENST00000544093 DFNA5O60443 496 aa23.7■■□□□ 1.38
CHFR-222ENST00000544093 ZNF252P-AS1Q0IIN9 211 aa23.7■■□□□ 1.38
CHFR-222ENST00000544093 PIGHQ14442 188 aaPredicted RBP23.7■■□□□ 1.38
CHFR-222ENST00000544093 HLA-BQ31612 363 aa23.7■■□□□ 1.38
CHFR-222ENST00000544093 ZNF354CQ86Y25 554 aa23.7■■□□□ 1.38
CHFR-222ENST00000544093 ANKRD6Q9Y2G4 727 aa23.7■■□□□ 1.38
CHFR-222ENST00000544093 PCDHGB2Q9Y5G2 931 aa23.7■■□□□ 1.38
CHFR-222ENST00000544093 KNL1Q8NG31 2342 aa23.69■■□□□ 1.38
CHFR-222ENST00000544093 EEF2KO00418 725 aaKnown RBP23.69■■□□□ 1.38
CHFR-222ENST00000544093 LRCH4O75427 683 aa23.69■■□□□ 1.38
CHFR-222ENST00000544093 LEFTY1O75610 366 aa23.69■■□□□ 1.38
CHFR-222ENST00000544093 CD160O95971 181 aa23.69■■□□□ 1.38
CHFR-222ENST00000544093 GSRP00390 522 aa23.69■■□□□ 1.38
CHFR-222ENST00000544093 MIPP30301 263 aa23.69■■□□□ 1.38
CHFR-222ENST00000544093 DNA2P51530 1060 aa23.69■■□□□ 1.38
CHFR-222ENST00000544093 CCNHP51946 323 aaPredicted RBP23.69■■□□□ 1.38
CHFR-222ENST00000544093 NDST2P52849 883 aa23.69■■□□□ 1.38
CHFR-222ENST00000544093 METAP1P53582 386 aa23.69■■□□□ 1.38
CHFR-222ENST00000544093 C21orf59P57076 290 aa23.69■■□□□ 1.38
CHFR-222ENST00000544093 SNRPD1P62314 119 aaKnown RBP23.69■■□□□ 1.38
CHFR-222ENST00000544093 NFKBIBQ15653 356 aa23.69■■□□□ 1.38
CHFR-222ENST00000544093 INO80DQ53TQ3 878 aaPredicted RBP23.69■■□□□ 1.38
CHFR-222ENST00000544093 ARSIQ5FYB1 569 aa23.69■■□□□ 1.38
CHFR-222ENST00000544093 N4BP2L1Q5TBK1 243 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms