RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 CCDC181Q5TID7 509 aa13.88□□□□□ -0.19
SP140-213ENST00000543928 C22orf39Q6P5X5 142 aa13.88□□□□□ -0.19
SP140-213ENST00000543928 TSSK4Q6SA08 328 aa13.88□□□□□ -0.19
SP140-213ENST00000543928 Q6ZVU0 165 aa13.88□□□□□ -0.19
SP140-213ENST00000543928 LRRC49Q8IUZ0 686 aa13.88□□□□□ -0.19
SP140-213ENST00000543928 LRRN4Q8WUT4 740 aa13.88□□□□□ -0.19
SP140-213ENST00000543928 CASKIN2Q8WXE0 1202 aa13.88□□□□□ -0.19
SP140-213ENST00000543928 P3H4Q92791 437 aa13.88□□□□□ -0.19
SP140-213ENST00000543928 PTPRN2Q92932 1015 aa13.88□□□□□ -0.19
SP140-213ENST00000543928 OLFM3Q96PB7 478 aa13.88□□□□□ -0.19
SP140-213ENST00000543928 CEP44Q9C0F1 390 aa13.88□□□□□ -0.19
SP140-213ENST00000543928 CARD9Q9H257 536 aa13.88□□□□□ -0.19
SP140-213ENST00000543928 TNKS2Q9H2K2 1166 aa13.88□□□□□ -0.19
SP140-213ENST00000543928 PRMT8Q9NR22 394 aaPredicted RBP13.88□□□□□ -0.19
SP140-213ENST00000543928 SHROOM3Q8TF72 1996 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 APOC4-APOC2K7ER74 178 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 GALR2O43603 387 aaPredicted RBP13.87□□□□□ -0.19
SP140-213ENST00000543928 BNIP3LO60238 219 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 ZNF821O75541 412 aaPredicted RBP13.87□□□□□ -0.19
SP140-213ENST00000543928 APBB3O95704 486 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 APOC2P02655 101 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 ATP1A1P05023 1023 aaKnown RBP13.87□□□□□ -0.19
SP140-213ENST00000543928 NUBP1P53384 320 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 CSTF1Q05048 431 aaKnown RBP13.87□□□□□ -0.19
SP140-213ENST00000543928 PDK1Q15118 436 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 CYTH1Q15438 398 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 C9orf64Q5T6V5 341 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 ANO7Q6IWH7 933 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 BZW1Q7L1Q6 419 aaKnown RBP13.87□□□□□ -0.19
SP140-213ENST00000543928 METTL3Q86U44 580 aaKnown RBP13.87□□□□□ -0.19
SP140-213ENST00000543928 MAML2Q8IZL2 1156 aaPredicted RBP13.87□□□□□ -0.19
SP140-213ENST00000543928 CAMKK1Q8N5S9 505 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 PCDH20Q8N6Y1 951 aaKnown RBP13.87□□□□□ -0.19
SP140-213ENST00000543928 CCNYQ8ND76 341 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 ISG20Q96AZ6 181 aaKnown RBP13.87□□□□□ -0.19
SP140-213ENST00000543928 HDAC11Q96DB2 347 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 ZNF599Q96NL3 588 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 TSGA13Q96PP4 275 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 LGMNQ99538 433 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 TM6SF2Q9BZW4 377 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 ZKSCAN5Q9Y2L8 839 aa13.87□□□□□ -0.19
SP140-213ENST00000543928 PPP1R12AO14974 1030 aaPredicted RBP13.86□□□□□ -0.19
SP140-213ENST00000543928 ZBTB24O43167 697 aaPredicted RBP13.86□□□□□ -0.19
SP140-213ENST00000543928 ALDH1A2O94788 518 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 PEX11BO96011 259 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 GABRG2P18507 467 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 CCNCP24863 283 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 CXCR5P32302 372 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 RECQLP46063 649 aaPredicted RBP13.86□□□□□ -0.19
SP140-213ENST00000543928 COPAP53621 1224 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 RHOAP61586 193 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 PPIDQ08752 370 aaKnown RBP13.86□□□□□ -0.19
SP140-213ENST00000543928 SLC10A7Q0GE19 358 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 KLF1Q13351 362 aaPredicted RBP13.86□□□□□ -0.19
SP140-213ENST00000543928 RFTN1Q14699 578 aaPredicted RBP13.86□□□□□ -0.19
SP140-213ENST00000543928 LBRQ14739 615 aaKnown RBP13.86□□□□□ -0.19
SP140-213ENST00000543928 ANGPT1Q15389 498 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 TMCO4Q5TGY1 634 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 TIGD7Q6NT04 549 aaPredicted RBP13.86□□□□□ -0.19
SP140-213ENST00000543928 CCDC13Q8IYE1 715 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 STK40Q8N2I9 435 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 OR2A12Q8NGT7 310 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 OR2T3Q8NH03 318 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 ACTL9Q8TC94 416 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 NSMCE1Q8WV22 266 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 HMGB4Q8WW32 186 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 CCDC114Q96M63 670 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 WDR24Q96S15 920 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 MKRN2Q9H000 416 aaKnown RBP13.86□□□□□ -0.19
SP140-213ENST00000543928 SLC6A17Q9H1V8 727 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.86□□□□□ -0.19
SP140-213ENST00000543928 BCCIPQ9P287 314 aaKnown RBP eCLIP13.86□□□□□ -0.19
SP140-213ENST00000543928 FBXO4Q9UKT5 387 aa13.86□□□□□ -0.19
SP140-213ENST00000543928 TCRBV7S2A1N4TA0A589 114 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 MATN3O15232 486 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 CEP104O60308 925 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 GSRP00390 522 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 TDGF1P13385 188 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 NDUFV2P19404 249 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 PXNP49023 591 aaPredicted RBP13.85□□□□□ -0.19
SP140-213ENST00000543928 OTUD4Q01804 1114 aaKnown RBP13.85□□□□□ -0.19
SP140-213ENST00000543928 DMWDQ09019 674 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 AP1B1Q10567 949 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 ELAVL3Q14576 367 aaKnown RBP13.85□□□□□ -0.19
SP140-213ENST00000543928 ZNF235Q14590 738 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 NOMO1Q15155 1222 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 CARD16Q5EG05 197 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 ATXN7L2Q5T6C5 722 aaPredicted RBP13.85□□□□□ -0.19
SP140-213ENST00000543928 HEATR6Q6AI08 1181 aaKnown RBP13.85□□□□□ -0.19
SP140-213ENST00000543928 DPY19L3Q6ZPD9 716 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 B4GALNT4Q76KP1 1039 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 ZC3H18Q86VM9 953 aaKnown RBP13.85□□□□□ -0.19
SP140-213ENST00000543928 RASSF3Q86WH2 238 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 CACUL1Q86Y37 369 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 SLC13A5Q86YT5 568 aaPredicted RBP13.85□□□□□ -0.19
SP140-213ENST00000543928 TMPRSS6Q8IU80 811 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 PGBD3Q8N328 593 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 RYBPQ8N488 228 aaPredicted RBP13.85□□□□□ -0.19
SP140-213ENST00000543928 MDGA1Q8NFP4 955 aa13.85□□□□□ -0.19
SP140-213ENST00000543928 OR8D1Q8WZ84 308 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms