RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 ZCWPW1Q9H0M4 648 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 PIF1Q9H611 641 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 RGS18Q9NS28 235 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 TRMT6Q9UJA5 497 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 CRYL1Q9Y2S2 319 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 PCDHB12Q9Y5F1 795 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 A0A087X1B8 175 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 C2orf81A6NN90 581 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 CLASP2O75122 1294 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ESRRBO95718 433 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 OAS1P00973 400 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 LTA4HP09960 611 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 BDNFP23560 247 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 SERPINB10P48595 397 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ATXN1P54253 815 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ADARP55265 1226 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 SEMA5AQ13591 1074 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 TREML2Q5T2D2 321 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ANKS6Q68DC2 871 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 AMIGO2Q86SJ2 522 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 DHRSXQ8N5I4 330 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ZNF781Q8N8C0 355 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 HASPINQ8TF76 798 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 SNX19Q92543 992 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 NDRG1Q92597 394 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 GORASP1Q9BQQ3 440 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 C17orf80Q9BSJ5 609 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 PAIP1Q9H074 479 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 PDZD7Q9H5P4 517 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 SPAG4Q9NPE6 437 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 KIF17Q9P2E2 1029 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 PKP3Q9Y446 797 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 NR2E3Q9Y5X4 410 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 E7ESA3 106 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ZBTB24O43167 697 aaPredicted RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 VPS26AO75436 327 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 RAP1GDS1P52306 607 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 MBTD1Q05BQ5 628 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 PEX6Q13608 980 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 EML3Q32P44 896 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 MGAT5BQ3V5L5 792 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 SGO1Q5FBB7 561 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 PRMT9Q6P2P2 845 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ZNF567Q8N184 647 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 MIER2Q8N344 545 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 MPP5Q8N3R9 675 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 DCUN1D1Q96GG9 259 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 GAD1Q99259 594 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 RBBP8Q99708 897 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 BDH2Q9BUT1 245 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 EBF3Q9H4W6 596 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 FAM124BQ9H5Z6 455 aaPredicted RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 GBA2Q9HCG7 927 aaPredicted RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 ACSS2Q9NR19 701 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 UTP6Q9NYH9 597 aaKnown RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 STK39Q9UEW8 545 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 PRG3Q9Y2Y8 225 aaPredicted RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 AK5Q9Y6K8 562 aa8.32□□□□□ -1.08
PRKAB1-207ENST00000542698 SOWAHBA6NEL2 793 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 DDNO94850 711 aaPredicted RBP8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 LDLRP01130 860 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 CDH2P19022 906 aaPredicted RBP8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 PRKCHP24723 683 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 CDH5P33151 784 aaPredicted RBP8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 OR1G1P47890 313 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 NEK3P51956 506 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 DPYSL2Q16555 572 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 OVOS1Q6IE37 1185 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 TAF2Q6P1X5 1199 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 POTEHQ6S545 545 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 PLEKHH3Q7Z736 793 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 CCDC185Q8N715 623 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 FAM162AQ96A26 154 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 ZNF512Q96ME7 567 aaPredicted RBP8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 NSMCE2Q96MF7 247 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 BTBD9Q96Q07 612 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 PPP1R10Q96QC0 940 aaKnown RBP8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 NPAS2Q99743 824 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 C9orf16Q9BUW7 83 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 ALG9Q9H6U8 611 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 CNGB3Q9NQW8 809 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 SEPT3Q9UH03 358 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 NUDT5Q9UKK9 219 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 GNEQ9Y223 722 aaKnown RBP8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 GPR182O15218 404 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 MAP3K13O43283 966 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 DEAF1O75398 565 aaPredicted RBP8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 AP2A1O95782 977 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 L1CAMP32004 1257 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 CYP2C18P33260 490 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 SERPINH1P50454 418 aaKnown RBP8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 EFEMP1Q12805 493 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 ATP6AP1LQ52LC2 224 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 C9orf57Q5W0N0 161 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 UNC5BQ8IZJ1 945 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 FBXO39Q8N4B4 442 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 WDTC1Q8N5D0 677 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 CEP19Q96LK0 163 aa8.31□□□□□ -1.08
PRKAB1-207ENST00000542698 ASB2Q96Q27 587 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms