RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 NFKB1P19838 968 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 SGSHP51688 502 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 GPX6P59796 221 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 CDK16Q00536 496 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 DUSP6Q16828 381 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 C6orf118Q5T5N4 469 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 THEMIS2Q5TEJ8 643 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 CAPN12Q6ZSI9 719 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 HTR3DQ70Z44 454 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 ZNF534Q76KX8 674 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 GRASPQ7Z6J2 395 aaPredicted RBP8.85□□□□□ -0.99
THBS3-210ENST00000541576 CMTM8Q8IZV2 173 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 CNTD1Q8N815 330 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 EPS8L3Q8TE67 593 aaKnown RBP8.85□□□□□ -0.99
THBS3-210ENST00000541576 PYROXD1Q8WU10 500 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 ZNF707Q96C28 371 aaPredicted RBP8.85□□□□□ -0.99
THBS3-210ENST00000541576 IL12RB2Q99665 862 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 GORASP1Q9BQQ3 440 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 SMG9Q9H0W8 520 aaKnown RBP8.85□□□□□ -0.99
THBS3-210ENST00000541576 TASP1Q9H6P5 420 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 NOD2Q9HC29 1040 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 TTLL3Q9Y4R7 772 aa8.85□□□□□ -0.99
THBS3-210ENST00000541576 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 TYW5A2RUC4 315 aaKnown RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 EPOPA6NHQ4 379 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 LEFTY2O00292 366 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 NTHL1P78549 312 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 ZNF177Q13360 481 aaPredicted RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 SERINC3Q13530 473 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 MAML1Q92585 1016 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 PABPC5Q96DU9 382 aaKnown RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 ELAC2Q9BQ52 826 aaKnown RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 MAGEH1Q9H213 219 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 PIDD1Q9HB75 910 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 XAB2Q9HCS7 855 aaKnown RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 RBM22Q9NW64 420 aaKnown RBP eCLIP8.84□□□□□ -0.99
THBS3-210ENST00000541576 NOTCH4Q99466 2003 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 A8MUI8 341 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 J3KR12 359 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 RASSF9O75901 435 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 ACVRL1P37023 503 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 RENBPP51606 427 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 GNA12Q03113 381 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 HNRNPDQ14103 355 aaKnown RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 LONRF1Q17RB8 773 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 CCDC38Q502W7 563 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 PRSS36Q5K4E3 855 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 GKAP1Q5VSY0 366 aaPredicted RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 EGFL6Q8IUX8 553 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 TNS4Q8IZW8 715 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 CCDC63Q8NA47 563 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 HJURPQ8NCD3 748 aaPredicted RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 FBXO36Q8NEA4 188 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 ARHGEF2Q92974 986 aaKnown RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 FATE1Q969F0 183 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 TMA16Q96EY4 203 aaKnown RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 TMEM109Q9BVC6 243 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 A0A0D9SEW6 157 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 SOBPA7XYQ1 873 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 ERI2A8K979 691 aaKnown RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 ZNF197O14709 1029 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 TBL1XO60907 577 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 PEX11BO96011 259 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 RHOCP08134 193 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 SSTR1P30872 391 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 ELK3P41970 407 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 NUMBP49757 651 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 IL10RBQ08334 325 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 OLIG2Q13516 323 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 SPARCL1Q14515 664 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 PRPSAP1Q14558 356 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 LRRC14Q15048 493 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 KDM7AQ6ZMT4 941 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 SETD3Q86TU7 594 aaPredicted RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 BBS7Q8IWZ6 715 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 FAM217AQ8IXS0 508 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 TDHQ8IZJ6 230 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 C12orf76Q8N812 135 aaPredicted RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 SH3RF2Q8TEC5 729 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 SMG7Q92540 1137 aaKnown RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 PPP2R3CQ969Q6 453 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 VPS37BQ9H9H4 285 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 ZMYM5Q9UJ78 669 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 G3BP2Q9UN86 482 aaKnown RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 CCL26Q9Y258 94 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 MRPS23Q9Y3D9 190 aaKnown RBP8.84□□□□□ -0.99
THBS3-210ENST00000541576 TEX264Q9Y6I9 313 aa8.84□□□□□ -0.99
THBS3-210ENST00000541576 PRRC2BQ5JSZ5 2229 aaKnown RBP8.84□□□□□ -1
THBS3-210ENST00000541576 ATG2AQ2TAZ0 1938 aa8.83□□□□□ -1
THBS3-210ENST00000541576 CHD5Q8TDI0 1954 aa8.83□□□□□ -1
THBS3-210ENST00000541576 ILVBLA1L0T0 632 aa8.83□□□□□ -1
THBS3-210ENST00000541576 GFRA2O00451 464 aa8.83□□□□□ -1
THBS3-210ENST00000541576 RASGRF2O14827 1237 aa8.83□□□□□ -1
THBS3-210ENST00000541576 AP2A1O95782 977 aa8.83□□□□□ -1
THBS3-210ENST00000541576 HLA-DQB2P05538 268 aa8.83□□□□□ -1
THBS3-210ENST00000541576 PDHA1P08559 390 aa8.83□□□□□ -1
THBS3-210ENST00000541576 ABHD2P08910 425 aa8.83□□□□□ -1
THBS3-210ENST00000541576 MLNP12872 115 aa8.83□□□□□ -1
THBS3-210ENST00000541576 MAGEA3P43357 314 aa8.83□□□□□ -1
THBS3-210ENST00000541576 SKOR1P84550 965 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms