RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 PIEZO1Q92508 2521 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 A0A0U1RQF3 1178 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 FAM159BA6NKW6 160 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 C3orf70A6NLC5 250 aaPredicted RBP10.59□□□□□ -0.71
CHFR-219ENST00000541341 ENDOD1O94919 500 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 IL18RAPO95256 599 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 ZSCAN5DPP0CG00 497 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 ARF4P18085 180 aaPredicted RBP10.59□□□□□ -0.71
CHFR-219ENST00000541341 HOXA11P31270 313 aaPredicted RBP10.59□□□□□ -0.71
CHFR-219ENST00000541341 CPOXP36551 454 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 ALDH1A3P47895 512 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 SLC1A6P48664 564 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 POLD2P49005 469 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 ALDH18A1P54886 795 aaKnown RBP10.59□□□□□ -0.71
CHFR-219ENST00000541341 MTTPP55157 894 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 FOLH1Q04609 750 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 RFTN1Q14699 578 aaPredicted RBP10.59□□□□□ -0.71
CHFR-219ENST00000541341 TEX44Q53QW1 395 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 RABGAP1LQ5R372 815 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 TDRD10Q5VZ19 366 aaKnown RBP10.59□□□□□ -0.71
CHFR-219ENST00000541341 ARMC3Q5W041 872 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 RWDD4Q6NW29 188 aaKnown RBP10.59□□□□□ -0.71
CHFR-219ENST00000541341 SLC39A4Q6P5W5 647 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 CAPN12Q6ZSI9 719 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 CATSPER4Q7RTX7 472 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 ZNF280BQ86YH2 543 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 ZDHHC17Q8IUH5 632 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 UNC5BQ8IZJ1 945 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 PQLC1Q8N2U9 271 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 UBR7Q8N806 425 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 TDRD5Q8NAT2 981 aaKnown RBP10.59□□□□□ -0.71
CHFR-219ENST00000541341 FLCNQ8NFG4 579 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 DEPDC1BQ8WUY9 529 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 MRRFQ96E11 262 aaKnown RBP10.59□□□□□ -0.71
CHFR-219ENST00000541341 MPP4Q96JB8 637 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 SERAC1Q96JX3 654 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 CNDP1Q96KN2 507 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 PRICKLE1Q96MT3 831 aaPredicted RBP10.59□□□□□ -0.71
CHFR-219ENST00000541341 TSNARE1Q96NA8 513 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 EBNA1BP2Q99848 306 aaKnown RBP10.59□□□□□ -0.71
CHFR-219ENST00000541341 CNPY3Q9BT09 278 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 MSTO1Q9BUK6 570 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 VN1R3Q9BXE9 311 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 ZBP1Q9H171 429 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 MFSD1Q9H3U5 465 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 PIDD1Q9HB75 910 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 EIF2B3Q9NR50 452 aaKnown RBP10.59□□□□□ -0.71
CHFR-219ENST00000541341 TBC1D13Q9NVG8 400 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 GALNT8Q9NY28 637 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 COL4A3Q01955 1670 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 DOCK8Q8NF50 2099 aa10.59□□□□□ -0.71
CHFR-219ENST00000541341 A0A0B4J269 797 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 FOXO6A8MYZ6 492 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 F8VP50 259 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 H7C0C1 242 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 GOLGA8RI6L899 631 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 APOL1O14791 398 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 B4GALT5O43286 388 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 PRPSAP2O60256 369 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 GCATO75600 419 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 TOM1L1O75674 476 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 ESRRBO95718 433 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 ZBED1O96006 694 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 MPOP05164 745 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 HOXB8P17481 243 aaPredicted RBP10.58□□□□□ -0.72
CHFR-219ENST00000541341 ATICP31939 592 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 ATP5OP48047 213 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 SLC11A1P49279 550 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 HARS2P49590 506 aaKnown RBP10.58□□□□□ -0.72
CHFR-219ENST00000541341 ZNF143P52747 638 aaPredicted RBP10.58□□□□□ -0.72
CHFR-219ENST00000541341 SLC25A11Q02978 314 aaKnown RBP10.58□□□□□ -0.72
CHFR-219ENST00000541341 GRAMD1BQ3KR37 738 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 SPATS1Q496A3 300 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 ZNF394Q53GI3 561 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 GRTP1Q5TC63 336 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 ATF7IP2Q5U623 682 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 FOXB2Q5VYV0 432 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 NOTUMQ6P988 496 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 SLC27A1Q6PCB7 646 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 UGT2A3Q6UWM9 527 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 MPZL3Q6UWV2 235 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 ASCL5Q7RTU5 278 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 BRSK2Q8IWQ3 736 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 HM13Q8TCT9 377 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 ANKRD36BP1Q96IX9 119 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 VPS50Q96JG6 964 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 IKZF4Q9H2S9 585 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 EBF3Q9H4W6 596 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 PDZD7Q9H5P4 517 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 PLGRKTQ9HBL7 147 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 MRM3Q9HC36 420 aaKnown RBP10.58□□□□□ -0.72
CHFR-219ENST00000541341 ARHGEF4Q9NR80 690 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 FAM105AQ9NUU6 356 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 PAIP2BQ9ULR5 123 aaKnown RBP10.58□□□□□ -0.72
CHFR-219ENST00000541341 POMPQ9Y244 141 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 WASF2Q9Y6W5 498 aa10.58□□□□□ -0.72
CHFR-219ENST00000541341 C15orf38-AP3S2A0A0A6YYH1 394 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 MAGEB16A2A368 324 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 RGSL1A5PLK6 1076 aa10.57□□□□□ -0.72
CHFR-219ENST00000541341 PRR5-ARHGAP8B1AHC4 643 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms