RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 IL12RB1P42701 662 aa17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 MARCKSL1P49006 195 aa17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 NSUN2Q08J23 767 aaKnown RBP eCLIP17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 MTAPQ13126 283 aa17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 CAMK2GQ13555 558 aaPredicted RBP17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 ELAVL3Q14576 367 aaKnown RBP17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 DLG2Q15700 870 aa17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 ZNF528Q3MIS6 628 aa17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 NPWQ8N729 165 aa17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 CYB5D2Q8WUJ1 264 aa17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 CELF6Q96J87 481 aaKnown RBP17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 MRGPRX3Q96LB0 322 aa17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 VAT1Q99536 393 aa17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 TLR10Q9BXR5 811 aa17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 DTLQ9NZJ0 730 aa17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 SEPT3Q9UH03 358 aa17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 PACSIN2Q9UNF0 486 aaPredicted RBP17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 HEY1Q9Y5J3 304 aa17.85■□□□□ 0.45
CLSTN3-210ENST00000540931 PRR23AA6NEV1 266 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 MATN3O15232 486 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 PI15O43692 258 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 APBB3O95704 486 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 GSRP00390 522 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 C7P10643 843 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 SRCP12931 536 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 CSNK1DP48730 415 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 ARF5P84085 180 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 PPIDQ08752 370 aaKnown RBP17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 EMC10Q5UCC4 262 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 MARC1Q5VT66 337 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 FAM46CQ5VWP2 391 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 SLC35F6Q8N357 371 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 CCNYQ8ND76 341 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 TSTD1Q8NFU3 115 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 OR2T3Q8NH03 318 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 TFB1MQ8WVM0 346 aaKnown RBP17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 OR8D1Q8WZ84 308 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 RPL10LQ96L21 214 aaKnown RBP17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 ETNK2Q9NVF9 386 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 CACNA2D2Q9NY47 1150 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 RNF14Q9UBS8 474 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 EBF1Q9UH73 591 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 TTC7AQ9ULT0 858 aaPredicted RBP17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 GVINP1Q7Z2Y8 2422 aa17.84■□□□□ 0.45
CLSTN3-210ENST00000540931 SGK1O00141 431 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 MCF2LO15068 1137 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 MFSD11O43934 449 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 SNAP91O60641 907 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 MAFKO60675 156 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 ZNF217O75362 1048 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 STK10O94804 968 aaKnown RBP17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 IGSF6O95976 241 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 PRNPP04156 253 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 KRT10P13645 584 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 ZNF235Q14590 738 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 C22orf39Q6P5X5 142 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 Q6ZS52 159 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 C11orf74Q86VG3 221 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 CCDC13Q8IYE1 715 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 CCDC33Q8N5R6 958 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 SORCS1Q8WY21 1168 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 MYO19Q96H55 970 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 GDAP1L1Q96MZ0 367 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 OLFM3Q96PB7 478 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 PPP1R2P1Q96PQ5 205 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 NAPGQ99747 312 aaPredicted RBP17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 CINPQ9BW66 212 aaPredicted RBP17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 PDFQ9HBH1 243 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 PRMT8Q9NR22 394 aaPredicted RBP17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 SLCO3A1Q9UIG8 710 aa17.83■□□□□ 0.44
CLSTN3-210ENST00000540931 DMDP11532 3685 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 A0A1W2PQ67 120 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 CFAP69A5D8W1 941 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 C1QTNF3-AMACRE9PGA6 284 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 ADAM23O75077 832 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 POP4O95707 220 aaKnown RBP17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 ADH1BP00325 375 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 CHRM1P11229 460 aaPredicted RBP17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 CNR2P34972 360 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 CTSOP43234 321 aaPredicted RBP17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 RHOAP61586 193 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 ETF1P62495 437 aaKnown RBP17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 DYNLT1P63172 113 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 GBE1Q04446 702 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 LBRQ14739 615 aaKnown RBP17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 TTC31Q49AM3 519 aaPredicted RBP17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 CARD16Q5EG05 197 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 SLC13A5Q86YT5 568 aaPredicted RBP17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 CDKL3Q8IVW4 592 aaPredicted RBP17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 TMIEQ8NEW7 156 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 OR2AP1Q8NGE2 309 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 FRS2Q8WU20 508 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 PPP1R16AQ96I34 528 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 PSKH2Q96QS6 385 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 HEMGNQ9BXL5 484 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 OSBPL1AQ9BXW6 950 aa17.82■□□□□ 0.44
CLSTN3-210ENST00000540931 USP27XA6NNY8 438 aa17.81■□□□□ 0.44
CLSTN3-210ENST00000540931 TMCC1O94876 653 aa17.81■□□□□ 0.44
CLSTN3-210ENST00000540931 ACADMP11310 421 aa17.81■□□□□ 0.44
CLSTN3-210ENST00000540931 NFKBIAP25963 317 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 245 ms