RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 DPY19L3Q6ZPD9 716 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 PRR23CQ6ZRP0 262 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 USP30Q70CQ3 517 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 POLNQ7Z5Q5 900 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 SYT12Q8IV01 421 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 NPWQ8N729 165 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 NETO2Q8NC67 525 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 CHST14Q8NCH0 376 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 CADM4Q8NFZ8 388 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 PIP4K2CQ8TBX8 421 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 GRIN3AQ8TCU5 1115 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 RFFLQ8WZ73 363 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 SNX19Q92543 992 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 ZNF419Q96HQ0 510 aaPredicted RBP9.41□□□□□ -0.9
SNHG1-215ENST00000540904 CSPG4P5Q96PW8 444 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 TM6SF2Q9BZW4 377 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 CEP44Q9C0F1 390 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 LRRC19Q9H756 370 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 SGK2Q9HBY8 427 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 PCDH18Q9HCL0 1135 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 LCMT1Q9UIC8 334 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 PILRBQ9UKJ0 227 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 SARDHQ9UL12 918 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 INTUQ9ULD6 942 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 PPM1HQ9ULR3 514 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 EML5Q05BV3 1969 aa9.41□□□□□ -0.9
SNHG1-215ENST00000540904 CKAP5Q14008 2032 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 CXorf51AA0A1B0GTR3 108 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 ARHGAP42A6NI28 874 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 METTL12A8MUP2 240 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 PATE3B3GLJ2 98 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 C1QTNF3-AMACRE9PGA6 284 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 J3KR12 359 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 KPNA3O00505 521 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 KHNYNO15037 678 aaKnown RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 ALOX15BO15296 676 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 GDF9O60383 454 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 ZNF821O75541 412 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 TMCC1O94876 653 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 FSBPO95073 299 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 IPO7O95373 1038 aaKnown RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 PRNPP04156 253 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 CFIP05156 583 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 CTSLP07711 333 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 AMPD1P23109 780 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 CDC25BP30305 580 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 MAN1A1P33908 653 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 DRD3P35462 400 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 MAGEA1P43355 309 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 NOP2P46087 812 aaKnown RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 CCNHP51946 323 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 TAS2R40P59535 323 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 MMRN1Q13201 1228 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 AASDHQ4L235 1098 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 TRIM61Q5EBN2 209 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 CARD16Q5EG05 197 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 ARSIQ5FYB1 569 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 WDR45BQ5MNZ6 344 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 ZFYVE27Q5T4F4 411 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 DCAF12L1Q5VU92 463 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 NCEH1Q6PIU2 408 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 TMCO3Q6UWJ1 677 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 TMTC1Q8IUR5 882 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 RYBPQ8N488 228 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 PCDH20Q8N6Y1 951 aaKnown RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 KCTD6Q8NC69 237 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 OR6K2Q8NGY2 324 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 OR14C36Q8NHC7 312 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 ISG20Q96AZ6 181 aaKnown RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 CALN1Q9BXU9 219 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 SLC39A8Q9C0K1 460 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 MIR1-1HGQ9H1L0 117 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 C6orf106Q9H6K1 298 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 LUC7LQ9NQ29 371 aaKnown RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 RXFP3Q9NSD7 469 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 KLHL11Q9NVR0 708 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 IMPACTQ9P2X3 320 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 HECAQ9UBI9 543 aaPredicted RBP9.4□□□□□ -0.9
SNHG1-215ENST00000540904 IL36AQ9UHA7 158 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 FZD4Q9ULV1 537 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 TFR2Q9UP52 801 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 MFHAS1Q9Y4C4 1052 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 PCDHA13Q9Y5I0 950 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 DMDP11532 3685 aa9.4□□□□□ -0.9
SNHG1-215ENST00000540904 PTPRZ1P23471 2315 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-215ENST00000540904 OTOGLQ3ZCN5 2332 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 SDK1Q7Z5N4 2213 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 EP300Q09472 2414 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-215ENST00000540904 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-215ENST00000540904 LRRC72A6NJI9 287 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 RNF103O00237 685 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 FOXD2O60548 495 aaPredicted RBP9.39□□□□□ -0.91
SNHG1-215ENST00000540904 LEFTY1O75610 366 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 MTA2O94776 668 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 NDUFA10O95299 355 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 LCA5LO95447 670 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 KRT7P08729 469 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 CD48P09326 243 aa9.39□□□□□ -0.91
SNHG1-215ENST00000540904 TNNT1P13805 278 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms