RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 P2RY11Q96G91 374 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 ANKRD36BP1Q96IX9 119 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 SLC46A1Q96NT5 459 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 KCNK16Q96T55 309 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 PLIN2Q99541 437 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 MRPL45Q9BRJ2 306 aaKnown RBP4.81□□□□□ -1.64
SNHG1-214ENST00000540865 STRA6Q9BX79 667 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 SLC2A11Q9BYW1 496 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 DCLK3Q9C098 648 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 CIPCQ9C0C6 399 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 TMEM245Q9H330 911 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 ZHX3Q9H4I2 956 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 FBXO44Q9H4M3 255 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 PDE11AQ9HCR9 933 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 DMAP1Q9NPF5 467 aaPredicted RBP4.81□□□□□ -1.64
SNHG1-214ENST00000540865 TLR8Q9NR97 1041 aaKnown RBP4.81□□□□□ -1.64
SNHG1-214ENST00000540865 AASDHPPTQ9NRN7 309 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 INTS13Q9NVM9 706 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 SCML1Q9UN30 329 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 PLA2G4CQ9UP65 541 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 EXOC7Q9UPT5 735 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 NCKAP1Q9Y2A7 1128 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 NME7Q9Y5B8 376 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 FBN2P35556 2912 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 OBSL1O75147 1896 aa4.81□□□□□ -1.64
SNHG1-214ENST00000540865 UTP20O75691 2785 aaKnown RBP4.81□□□□□ -1.64
SNHG1-214ENST00000540865 ANK1P16157 1881 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 LRRC72A6NJI9 287 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 A8MXQ7 604 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 TRIM38O00635 465 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 KIAA0391O15091 583 aaKnown RBP4.8□□□□□ -1.64
SNHG1-214ENST00000540865 SIGLEC6O43699 453 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 MAGEC1O60732 1142 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 CSO75390 466 aaKnown RBP4.8□□□□□ -1.64
SNHG1-214ENST00000540865 STC2O76061 302 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 PRPF6O94906 941 aaKnown RBP4.8□□□□□ -1.64
SNHG1-214ENST00000540865 UBOX5O94941 541 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 TNNC2P02585 160 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 CYBBP04839 570 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 GP1BAP07359 652 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 CKMT1AP12532 417 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 MYF5P13349 255 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 FOSL1P15407 271 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 NME1P15531 152 aaKnown RBP4.8□□□□□ -1.64
SNHG1-214ENST00000540865 PGFP49763 221 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 CCR5P51681 352 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 GALCP54803 685 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 OXCT1P55809 520 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 NFKB2Q00653 900 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 TLE1Q04724 770 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 OVGP1Q12889 678 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 SURF1Q15526 300 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 FNDC3BQ53EP0 1204 aaKnown RBP4.8□□□□□ -1.64
SNHG1-214ENST00000540865 HS1BP3Q53T59 392 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 L1TD1Q5T7N2 865 aaKnown RBP4.8□□□□□ -1.64
SNHG1-214ENST00000540865 TMEM215Q68D42 235 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 ZNF776Q68DI1 518 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-214ENST00000540865 NCEH1Q6PIU2 408 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 PAQR9Q6ZVX9 377 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 CENPQQ7L2Z9 268 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-214ENST00000540865 TADA2BQ86TJ2 420 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 IQCHQ86VS3 1027 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 LSRQ86X29 649 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-214ENST00000540865 SPATS2Q86XZ4 545 aaKnown RBP4.8□□□□□ -1.64
SNHG1-214ENST00000540865 PLD6Q8N2A8 252 aaKnown RBP4.8□□□□□ -1.64
SNHG1-214ENST00000540865 ZNF276Q8N554 614 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 ZSWIM2Q8NEG5 633 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 OR5B17Q8NGF7 314 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 OR2T34Q8NGX1 318 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 GANCQ8TET4 914 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 WFIKKN2Q8TEU8 576 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 CPLX3Q8WVH0 158 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 HPS3Q969F9 1004 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 SMARCD1Q96GM5 515 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 FAM84AQ96KN4 292 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 CCDC74BQ96LY2 380 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 AK8Q96MA6 479 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 ACCSQ96QU6 501 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 CCNL2Q96S94 520 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-214ENST00000540865 MED10Q9BTT4 135 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.8□□□□□ -1.644e-59■■■□□ 16.1
SNHG1-214ENST00000540865 IKZF4Q9H2S9 585 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 PABPC3Q9H361 631 aaKnown RBP4.8□□□□□ -1.64
SNHG1-214ENST00000540865 DPEP3Q9H4B8 488 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 EBF2Q9HAK2 575 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 USP29Q9HBJ7 922 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 PRSS16Q9NQE7 514 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 SEL1LQ9UBV2 794 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 SUN2Q9UH99 717 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 SCML2Q9UQR0 700 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 MAN2B2Q9Y2E5 1009 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 PCDHGA8Q9Y5G5 932 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 LRBAP50851 2863 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 CEP192Q8TEP8 1941 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 ANAPC1Q9H1A4 1944 aa4.8□□□□□ -1.64
SNHG1-214ENST00000540865 A0A1B0GVM2 712 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 GOLGA8IPA6NC78 632 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 FAM47DPA6NHR8 397 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 ZNF233A6NK53 670 aa4.79□□□□□ -1.64
SNHG1-214ENST00000540865 GOLGA8JA6NMD2 632 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms