RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 LTA4HP09960 611 aaKnown RBP6.57□□□□□ -1.36
LSAMP-207ENST00000539563 ZCCHC18P0CG32 403 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 PTPRAP18433 802 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 PSMB4P28070 264 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 LRPAP1P30533 357 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 CHKAP35790 457 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 MAMLD1Q13495 774 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 TRIQKQ629K1 86 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 IL27RAQ6UWB1 636 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 PAGE2Q7Z2X7 111 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 SYT12Q8IV01 421 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 CLYBLQ8N0X4 340 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 ALLCQ8N6M5 410 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 ZSWIM2Q8NEG5 633 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 RDH11Q8TC12 318 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 RNF157Q96PX1 679 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 TRAPPC9Q96Q05 1148 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 TINF2Q9BSI4 451 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 OXCT2Q9BYC2 517 aaPredicted RBP6.57□□□□□ -1.36
LSAMP-207ENST00000539563 SERHL2Q9H4I8 314 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 SERHLQ9NQF3 203 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 ARL15Q9NXU5 204 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 GIT1Q9Y2X7 761 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 KNDC1Q76NI1 1749 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 URADA6NGE7 173 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 LRRC10BA6NIK2 292 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 SLC15A5A6NIM6 579 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 H7C0S8 307 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 KCNK1O00180 336 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 CCNB1P14635 433 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 CES5AQ6NT32 575 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 C11orf88Q6PI97 169 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 DCLRE1AQ6PJP8 1040 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 NEK10Q6ZWH5 1172 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 PHF13Q86YI8 300 aaPredicted RBP6.57□□□□□ -1.36
LSAMP-207ENST00000539563 EPS8L1Q8TE68 723 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 CEP41Q9BYV8 373 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 REEP1Q9H902 201 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 CDHR5Q9HBB8 845 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 OR12D3Q9UGF7 316 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 MYRFQ9Y2G1 1151 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 ARIH1Q9Y4X5 557 aaPredicted RBP6.57□□□□□ -1.36
LSAMP-207ENST00000539563 C1QTNF3-AMACRE9PGA6 284 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 KPNA4O00629 521 aaPredicted RBP6.57□□□□□ -1.36
LSAMP-207ENST00000539563 WARSP23381 471 aaKnown RBP6.57□□□□□ -1.36
LSAMP-207ENST00000539563 ADRA1DP25100 572 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 SPIDRQ14159 915 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 SQLEQ14534 574 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 SLC9A5Q14940 896 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 NOMO2Q5JPE7 1267 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 C16orf59Q7L2K0 433 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 VGLL2Q8N8G2 317 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 CKAP2Q8WWK9 683 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 CERS2Q96G23 380 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 GAD1Q99259 594 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 PCDHGA4Q9Y5G9 962 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 UBIAD1Q9Y5Z9 338 aa6.57□□□□□ -1.36
LSAMP-207ENST00000539563 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 PDE5AO76074 875 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 PDE9AO76083 593 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 CSH1P0DML2 217 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 CSH2P0DML3 217 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 TLX1P31314 330 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 EPS8Q12929 822 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 PLEKHA7Q6IQ23 1121 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 WDR59Q6PJI9 974 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 MACC1Q6ZN28 852 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 DEFB132Q7Z7B7 95 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 TRAPPC5Q8IUR0 188 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 LRRC52Q8N7C0 313 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 ZFP28Q8NHY6 868 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 TRAPPC12Q8WVT3 735 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 WDR18Q9BV38 432 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 TRIM8Q9BZR9 551 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 SMPD4Q9NXE4 827 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 LRCH1Q9Y2L9 728 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 GSTK1Q9Y2Q3 226 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 TSC22D4Q9Y3Q8 395 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 FAM25AB3EWG3 89 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 FAM25CB3EWG5 89 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 FAM25GB3EWG6 89 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 ADM5C9JUS6 153 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 KPNA3O00505 521 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 LIASO43766 372 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 LBPP18428 481 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 GLRA2P23416 452 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 NTSP30990 170 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 RNF43Q68DV7 783 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 NEPROQ6NW34 567 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 BHLHB9Q6PI77 547 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 CAMKK1Q8N5S9 505 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 GDPD5Q8WTR4 605 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 PLSCR1O15162 318 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 HIST1H2ABP04908 130 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 SNRPB2P08579 225 aaKnown RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 MAPK9P45984 424 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 RTP1P59025 263 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 SLC44A4Q53GD3 710 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 HIST3H2AQ7L7L0 130 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms