RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 APOL1O14791 398 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 NCAM2O15394 837 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 SIN3BO75182 1162 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 ATP5BP06576 529 aaKnown RBP13.24□□□□□ -0.29
CCDC42-202ENST00000539522 CTSLP07711 333 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 HOXB2P14652 356 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 CXCR5P32302 372 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 GARSP41250 739 aaKnown RBP13.24□□□□□ -0.29
CCDC42-202ENST00000539522 SULT2A1Q06520 285 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 SLC10A7Q0GE19 358 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 DLG2Q15700 870 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 FNDC3BQ53EP0 1204 aaKnown RBP13.24□□□□□ -0.29
CCDC42-202ENST00000539522 ZFYVE27Q5T4F4 411 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 Q6ZVU0 165 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 CREG2Q8IUH2 290 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 CCDC117Q8IWD4 279 aaPredicted RBP13.24□□□□□ -0.29
CCDC42-202ENST00000539522 CHST14Q8NCH0 376 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 OR2A12Q8NGT7 310 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 COG1Q8WTW3 980 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 NELL1Q92832 810 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 EXOC4Q96A65 974 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 HAUS1Q96CS2 278 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 HHIPQ96QV1 700 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 LGMNQ99538 433 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 MKRN2Q9H000 416 aaKnown RBP13.24□□□□□ -0.29
CCDC42-202ENST00000539522 TNKS2Q9H2K2 1166 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 C10orf88Q9H8K7 445 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 IPO11Q9UI26 975 aaKnown RBP13.24□□□□□ -0.29
CCDC42-202ENST00000539522 EFR3BQ9Y2G0 817 aa13.24□□□□□ -0.29
CCDC42-202ENST00000539522 TTC24A2A3L6 582 aaPredicted RBP13.23□□□□□ -0.29
CCDC42-202ENST00000539522 ARHGAP42A6NI28 874 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 ZNF185O15231 689 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 TMCC1O94876 653 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 EPHX1P07099 455 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 GABRG2P18507 467 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 MAGEA9P43362 315 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 PXNP49023 591 aaPredicted RBP13.23□□□□□ -0.29
CCDC42-202ENST00000539522 NRLP54845 237 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 IL10RBQ08334 325 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 PRKD1Q15139 912 aaPredicted RBP13.23□□□□□ -0.29
CCDC42-202ENST00000539522 HSF5Q4G112 596 aaPredicted RBP13.23□□□□□ -0.29
CCDC42-202ENST00000539522 CCDC181Q5TID7 509 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 C22orf39Q6P5X5 142 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 SERPINA13PQ6UXR4 307 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 RASSF3Q86WH2 238 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 CCDC50Q8IVM0 306 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 C1orf210Q8IVY1 113 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 TEX26Q8N6G2 289 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 MDGA1Q8NFP4 955 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 MYRIPQ8NFW9 859 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 ACTRT1Q8TDG2 376 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 UCMAQ8WVF2 138 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 MAML1Q92585 1016 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 HDAC11Q96DB2 347 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 TSGA13Q96PP4 275 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 CARD6Q9BX69 1037 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 C1QTNF1Q9BXJ1 281 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 CARD9Q9H257 536 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 SPATA6Q9NWH7 488 aaPredicted RBP13.23□□□□□ -0.29
CCDC42-202ENST00000539522 SMARCAL1Q9NZC9 954 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 EBF1Q9UH73 591 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 SARDHQ9UL12 918 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 TTC7AQ9ULT0 858 aaPredicted RBP13.23□□□□□ -0.29
CCDC42-202ENST00000539522 PLA2G4CQ9UP65 541 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 HEY1Q9Y5J3 304 aa13.23□□□□□ -0.29
CCDC42-202ENST00000539522 CTAGE15A4D2H0 777 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 NPC1O15118 1278 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 INSIG1O15503 277 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 CEP104O60308 925 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 CTAGE8P0CG41 777 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 NDUFV2P19404 249 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 TGM2P21980 687 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 GKP32189 559 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 SERPINB6P35237 376 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 ETFBP38117 255 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 CXCL12P48061 93 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 PPIDQ08752 370 aaKnown RBP13.22□□□□□ -0.29
CCDC42-202ENST00000539522 ZBTB17Q13105 803 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 NOMO1Q15155 1222 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 KCTD19Q17RG1 926 aaPredicted RBP13.22□□□□□ -0.29
CCDC42-202ENST00000539522 INO80DQ53TQ3 878 aaPredicted RBP13.22□□□□□ -0.29
CCDC42-202ENST00000539522 ODF2Q5BJF6 829 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 EOGTQ5NDL2 527 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 ATXN7L2Q5T6C5 722 aaPredicted RBP13.22□□□□□ -0.29
CCDC42-202ENST00000539522 NUDT18Q6ZVK8 323 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 CTAGE6Q86UF2 777 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 SLC13A5Q86YT5 568 aaPredicted RBP13.22□□□□□ -0.29
CCDC42-202ENST00000539522 CTAGE4Q8IX94 777 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 STK40Q8N2I9 435 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 RASGEF1CQ8N431 466 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 CNTD1Q8N815 330 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 FRMD1Q8N878 549 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 ATP11CQ8NB49 1132 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 TSEN2Q8NCE0 465 aaKnown RBP13.22□□□□□ -0.29
CCDC42-202ENST00000539522 PRSS33Q8NF86 280 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 ACTL9Q8TC94 416 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 MS4A14Q96JA4 679 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 CAPZA3Q96KX2 299 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 MRGPRX1Q96LB2 322 aa13.22□□□□□ -0.29
CCDC42-202ENST00000539522 NAP1L3Q99457 506 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms