RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 SIGLEC16A6NMB1 481 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 AKR1B15C9JRZ8 316 aaPredicted RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 SPECC1L-ADORA2AF8WAN1 911 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 DDX3XO00571 662 aaKnown RBP eCLIP6.15□□□□□ -1.42
DDB1-210ENST00000538129 TRDMT1O14717 391 aaKnown RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 PPP1R12AO14974 1030 aaPredicted RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 NCAM2O15394 837 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 PAX4O43316 350 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 RTN2O75298 545 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 DAB1O75553 588 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 TRUB2O95900 331 aaKnown RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 IGLV3-25P01717 112 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 FTLP02792 175 aaPredicted RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 HMBSP08397 361 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 KRT3P12035 628 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 ARSAP15289 507 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 JUNBP17275 347 aaPredicted RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 TPP2P29144 1249 aaPredicted RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 CORO1AP31146 461 aaKnown RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 GJA4P35212 333 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 SLC11A2P49281 568 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 GSCP56915 257 aaPredicted RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 TBX4P57082 545 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 RNASE9P60153 205 aaKnown RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 GAD2Q05329 585 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 EIF4EBP2Q13542 120 aaPredicted RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 PPP2R5DQ14738 602 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 DHCR24Q15392 516 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 SLC25A52Q3SY17 297 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 ADGRF1Q5T601 910 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 FAM102AQ5T9C2 384 aaPredicted RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 E4F1Q66K89 784 aaPredicted RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 NUGGCQ68CJ6 796 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 TRIM68Q6AZZ1 485 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 MON1BQ7L1V2 547 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 TMC6Q7Z403 805 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 BBS7Q8IWZ6 715 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 MCOLN2Q8IZK6 566 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 CPXM2Q8N436 756 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 FAM169BQ8N8A8 192 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 OLIG1Q8TAK6 271 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 FAM3CQ92520 227 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 WBP2Q969T9 261 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 PGAP3Q96FM1 320 aaPredicted RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 SLC39A13Q96H72 371 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 PIWIL1Q96J94 861 aaKnown RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 NPY6RQ99463 290 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 DDX50Q9BQ39 737 aaKnown RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 C11orf70Q9BRQ4 267 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.15□□□□□ -1.42
DDB1-210ENST00000538129 MKRN2Q9H000 416 aaKnown RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 ISCUQ9H1K1 167 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 MFSD1Q9H3U5 465 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 SPHK2Q9NRA0 654 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 HEBP1Q9NRV9 189 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 SEMA3GQ9NS98 782 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 PARVAQ9NVD7 372 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 SLC12A6Q9UHW9 1150 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 DUSP13Q9UII6 198 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 AGO1Q9UL18 857 aaKnown RBP6.15□□□□□ -1.42
DDB1-210ENST00000538129 STAP1Q9ULZ2 295 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 SIT1Q9Y3P8 196 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 PAXBP1Q9Y5B6 917 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 PIAS3Q9Y6X2 628 aa6.15□□□□□ -1.42
DDB1-210ENST00000538129 ZNF318Q5VUA4 2279 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 CACNA1HO95180 2353 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 A0A087X0T9 212 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 TCRBV5S1A1TA0A578 114 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 SHISA7A6NL88 538 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 C2CD4BA6NLJ0 364 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 KCNU1A8MYU2 1149 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.14□□□□□ -1.43
DDB1-210ENST00000538129 GOLGA8SH3BPF8 625 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 M0QYT0 321 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 IRAK2O43187 625 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 HOXC11O43248 304 aaPredicted RBP6.14□□□□□ -1.43
DDB1-210ENST00000538129 MFAP3LO75121 409 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 GRAP2O75791 330 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 ENDOD1O94919 500 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 APOEP02649 317 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 CYP17A1P05093 508 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 FAM228BP0C875 321 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 MYBL1P10243 752 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 IRF1P10914 325 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 PDGFRAP16234 1089 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 AOC1P19801 751 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 ENDOUP21128 410 aaKnown RBP6.14□□□□□ -1.43
DDB1-210ENST00000538129 DRD1P21728 446 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 CCR1P32246 355 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 RFC1P35251 1148 aaPredicted RBP6.14□□□□□ -1.43
DDB1-210ENST00000538129 EIF2DP41214 584 aaKnown RBP6.14□□□□□ -1.43
DDB1-210ENST00000538129 MAGEA9P43362 315 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 GIPRP48546 466 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 CXCR3P49682 368 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 GALK1P51570 392 aa6.14□□□□□ -1.43
DDB1-210ENST00000538129 ADKP55263 362 aaKnown RBP6.14□□□□□ -1.43
DDB1-210ENST00000538129 GRSF1Q12849 480 aaKnown RBP eCLIP6.14□□□□□ -1.43
DDB1-210ENST00000538129 ASTE1Q2TB18 679 aaPredicted RBP6.14□□□□□ -1.43
DDB1-210ENST00000538129 PREPLQ4J6C6 727 aaPredicted RBP6.14□□□□□ -1.43
DDB1-210ENST00000538129 C2CD6Q53TS8 623 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms