RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 FAR1Q8WVX9 515 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 ASB9Q96DX5 294 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 RDH12Q96NR8 316 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 TCF12Q99081 682 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 RBBP8Q99708 897 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 NOL11Q9H8H0 719 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 USE1Q9NZ43 259 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 KIAA1522Q9P206 1035 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 AFF4Q9UHB7 1163 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 RGSL1A5PLK6 1076 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 C3orf70A6NLC5 250 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 CHADO15335 359 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 STX7O15400 261 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 TRIM13O60858 407 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SNNO75324 88 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 DBTP11182 482 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 PIK3R1P27986 724 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 NUDT1P36639 197 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SEPHS1P49903 392 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 COPZ1P61923 177 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SELPLGQ14242 412 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 PLCL1Q15111 1095 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 ATP13A4Q4VNC1 1196 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SEZ6Q53EL9 994 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 LACC1Q8IV20 430 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 CEP41Q9BYV8 373 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 PLEKHA5Q9HAU0 1116 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 MTMR4Q9NYA4 1195 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 BCORQ6W2J9 1755 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 CENPXA8MT69 81 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 FBXO21O94952 628 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 MYL3P08590 195 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 ITIH1P19827 911 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 RAD51Q06609 339 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 VAC14Q08AM6 782 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 FAM83EQ2M2I3 478 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SUPT20HL1Q3ZLR7 823 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 INTS11Q5TA45 600 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 MARCH7Q9H992 704 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 FANCEQ9HB96 536 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 RAVER2Q9HCJ3 691 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 NCF1BA6NI72 391 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 NCF1CA8MVU1 366 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 E5RI56 91 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 POLRMTO00411 1230 aaKnown RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 PAPSS1O43252 624 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 AQP9O43315 295 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 MOCS2O96007 188 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 CCNE2O96020 404 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 BPGMP07738 259 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 NCF1P14598 390 aaPredicted RBP5.47□□□□□ -1.53
PTPRD-213ENST00000537002 ADSSP30520 456 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 CDC20Q12834 499 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 PRKAA1Q13131 559 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 DPY19L2P1Q6NXN4 242 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 SLC30A10Q6XR72 485 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 PAGE2Q7Z2X7 111 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 TMC2Q8TDI7 906 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 KCNK13Q9HB14 408 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 CCDC167Q9P0B6 97 aa5.47□□□□□ -1.53
PTPRD-213ENST00000537002 K7EPI3 171 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 BTN3A3O00478 584 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 GAS2O43903 313 aaKnown RBP5.46□□□□□ -1.53
PTPRD-213ENST00000537002 ZNF682O95780 498 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 DPEP1P16444 411 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 CD40LGP29965 261 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 CSHL1Q14406 222 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 ARHGAP17Q68EM7 881 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 LRRC8DQ7L1W4 858 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 IPMKQ8NFU5 416 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 TMEM143Q96AN5 459 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 TSPAN17Q96FV3 270 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 CIB1Q99828 191 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 SLC2A11Q9BYW1 496 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 DBNDD1Q9H9R9 158 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 GDAP2Q9NXN4 497 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 ANKMY1Q9P2S6 941 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 PRR23AA6NEV1 266 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 H0YC42 278 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 MAGEB3O15480 346 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 MTSS1O43312 755 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 UGT1A9O60656 530 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 UGT1A6P19224 532 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 UGT1A1P22309 533 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 UGT1A4P22310 534 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 SLC7A1P30825 629 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 RPL22P35268 128 aaKnown RBP5.46□□□□□ -1.53
PTPRD-213ENST00000537002 UGT1A3P35503 534 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 UGT1A5P35504 534 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 ATP6V1E1P36543 226 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 TPI1P60174 286 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 GRAPQ13588 217 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 DPYSL3Q14195 570 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 ATP6AP1LQ52LC2 224 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 PAGE2BQ5JRK9 111 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 SZRD1Q7Z422 152 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 TRIM69Q86WT6 500 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 GRAPLQ8TC17 118 aaPredicted RBP5.46□□□□□ -1.53
PTPRD-213ENST00000537002 OTULINQ96BN8 352 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 DMRTB1Q96MA1 342 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 323.9 ms