RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SPA17Q15506 151 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 N4BP2L1Q5TBK1 243 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 RWDD4Q6NW29 188 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 DSG4Q86SJ6 1040 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PYROXD2Q8N2H3 581 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 OR2A12Q8NGT7 310 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PIP4K2CQ8TBX8 421 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 SPON2Q9BUD6 331 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ZDHHC5Q9C0B5 715 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 EBF2Q9HAK2 575 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ATP13A1Q9HD20 1204 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 OSGEPQ9NPF4 335 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ACACBO00763 2458 aa18.26■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ANKRD62A6NC57 917 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CBX4O00257 560 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ZNF821O75541 412 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CD160O95971 181 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CTSLP07711 333 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CD27P26842 260 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ACVRL1P37023 503 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 MAPKAPK2P49137 400 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CSNK1EP49674 416 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CLCN6P51797 869 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 SCYL2Q6P3W7 929 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TMEM139Q8IV31 216 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 LRRC8AQ8IWT6 810 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 OR2T34Q8NGX1 318 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 OR14C36Q8NHC7 312 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ZNF653Q96CK0 615 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TBC1D31Q96DN5 1066 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ACE2Q9BYF1 805 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 RETREG1Q9H6L5 497 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TM9SF3Q9HD45 589 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 LUC7LQ9NQ29 371 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PARVAQ9NVD7 372 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 DNAI1Q9UI46 699 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 FZD10Q9ULW2 581 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 NENFQ9UMX5 172 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 EPN1Q9Y6I3 576 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CHD8Q9HCK8 2581 aa18.25■□□□□ 0.51
TNFRSF1A-209ENST00000536717 A0A1W2PPC4 97 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 LRRC72A6NJI9 287 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 UPK3BL1B0FP48 263 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 UPK3BL2E5RIL1 263 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CEACAM1P13688 526 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 L1CAMP32004 1257 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 AFF3P51826 1226 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ZNF252P-AS1Q0IIN9 211 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CCDC173Q0VFZ6 552 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 POM121L1PQ3SYA9 428 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 FAM46CQ5VWP2 391 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 RETSATQ6NUM9 610 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 C22orf39Q6P5X5 142 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PIP4P1Q86T03 277 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 DEFB124Q8NES8 71 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ARHGEF2Q92974 986 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CNOT8Q9UFF9 292 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ACTL7AQ9Y615 435 aa18.24■□□□□ 0.51
TNFRSF1A-209ENST00000536717 A0A1B0GVT2 93 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 EIF3CLB5ME19 914 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 C1QTNF3-AMACRE9PGA6 284 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 RNF103O00237 685 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 NDUFA10O95299 355 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 H2AFZP0C0S5 128 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CD59P13987 128 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 GRIA4P48058 902 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 SERPINH1P50454 418 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CNTN1Q12860 1018 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 EFHC2Q5JST6 749 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 AGBL4Q5VU57 503 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 LAYNQ6UX15 382 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 H2AFVQ71UI9 128 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 EIF3CQ99613 913 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TNKS2Q9H2K2 1166 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PLRG1O43660 514 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 LCA5LO95447 670 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CHRNA3P32297 505 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 AIF1P55008 147 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PPP2CBP62714 309 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PPP2CAP67775 309 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 SLC20A2Q08357 652 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 RAD9BQ6WBX8 426 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ARFGAP1Q8N6T3 406 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CHST14Q8NCH0 376 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CTNNBL1Q8WYA6 563 aaPredicted RBP18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CCDC114Q96M63 670 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TRIM7Q9C029 511 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 THAP2Q9H0W7 228 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 IL21RQ9HBE5 538 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 MRPL47Q9HD33 250 aaKnown RBP18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 MYO1AQ9UBC5 1043 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 SCINQ9Y6U3 715 aa18.23■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ANKRD36A6QL64 1941 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CXorf51AA0A1B0GTR3 108 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TMEM191CA6NGB0 347 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 SLC7A4O43246 635 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PSMA2P25787 234 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 EPHB2P29323 1055 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PMLP29590 882 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms