RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 PMS2CLQ68D20 193 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 DPY19L3Q6ZPD9 716 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 DAAM2Q86T65 1068 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RHOT1Q8IXI2 618 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 AADATQ8N5Z0 425 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 LZTR1Q8N653 840 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 OR8D1Q8WZ84 308 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 KRT35Q92764 455 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 FAM122AQ96E09 287 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 SPACA7Q96KW9 195 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 RNF157Q96PX1 679 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 TM6SF2Q9BZW4 377 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 CEP44Q9C0F1 390 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PABPC3Q9H361 631 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 DONSONQ9NYP3 566 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 WSB2Q9NYS7 404 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 LHX3Q9UBR4 397 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 PPM1HQ9ULR3 514 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 DMDP11532 3685 aa11.53□□□□□ -0.56
TNFRSF1A-208ENST00000536194 DOCK9Q9BZ29 2069 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZSCAN5CA6NGD5 496 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZNF487B1APH4 448 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PLK4O00444 970 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ALOX15BO15296 676 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PSTPIP1O43586 416 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MAP3K6O95382 1288 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PEX11BO96011 259 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ACADMP11310 421 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CD6P30203 668 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GKP32189 559 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CCNHP51946 323 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GEMIN4P57678 1058 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZBTB16Q05516 673 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 KIF5AQ12840 1032 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SLC10A2Q12908 348 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PAFAH1B3Q15102 231 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CYTH1Q15438 398 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 POM121L1PQ3SYA9 428 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZFYVE27Q5T4F4 411 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MFSD7Q6UXD7 560 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 FAM124AQ86V42 546 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 VSIG1Q86XK7 387 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SLC41A1Q8IVJ1 513 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MAP7D3Q8IWC1 876 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 DEFB119Q8N690 84 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PCDH20Q8N6Y1 951 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PLD5Q8N7P1 536 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 OR6K2Q8NGY2 324 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ISG20Q96AZ6 181 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZNF419Q96HQ0 510 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PDLIM2Q96JY6 352 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 IPO11Q9UI26 975 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CAPN6Q9Y6Q1 641 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 WASF2Q9Y6W5 498 aa11.52□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PLXNA2O75051 1894 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SDK1Q7Z5N4 2213 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 A0A1W2PP55 124 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MAFKO60675 156 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PALMO75781 387 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 IL1BP01584 269 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 DNTTP04053 509 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 C5AR1P21730 350 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CHRNA3P32297 505 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SLC8A1P32418 973 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ACSL1P33121 698 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CTNNA1P35221 906 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SERPINB6P35237 376 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CDKN2BP42772 138 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PTGER3P43115 390 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RGRP47804 291 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 DNA2P51530 1060 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 NAP1L1P55209 391 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RPL6Q02878 288 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GBE1Q04446 702 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 IL10RBQ08334 325 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 BYSLQ13895 437 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TAZQ16635 292 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 INO80DQ53TQ3 878 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CARD16Q5EG05 197 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ATXN7L2Q5T6C5 722 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SLC9A4Q6AI14 798 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LAIR1Q6GTX8 287 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 NT5DC3Q86UY8 548 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PLPP6Q8IY26 295 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TMEFF1Q8IYR6 380 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 OR2AP1Q8NGE2 309 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PIP4K2CQ8TBX8 421 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LRRN4Q8WUT4 740 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 FAM131CQ96AQ9 280 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TOE1Q96GM8 510 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 EXOC2Q96KP1 924 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CALR3Q96L12 384 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 NEUROG2Q9H2A3 272 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 KCNF1Q9H3M0 494 aa11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 DDX56Q9NY93 547 aaKnown RBP11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 UBA2Q9UBT2 640 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-208ENST00000536194 C10orf142B7Z368 130 aa11.5□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MUSKO15146 869 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms