RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 RAPGEF5Q92565 580 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 ZNF670Q9BS34 389 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 PDFQ9HBH1 243 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 SERGEFQ9UGK8 458 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 SARDHQ9UL12 918 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 DUSP10Q9Y6W6 482 aa23.16■■□□□ 1.3
SFSWAP-204ENST00000535399 J3KR12 359 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 PJA2O43164 708 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 PRAMEF11O60813 436 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 ADH1BP00325 375 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 IL1BP01584 269 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 CTSLP07711 333 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 C5AR1P21730 350 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 PTGER3P43115 390 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 METAP1P53582 386 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 TMCO3Q6UWJ1 677 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 DPY19L3Q6ZPD9 716 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 USP30Q70CQ3 517 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 FAM124AQ86V42 546 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 PLPP6Q8IY26 295 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 AADATQ8N5Z0 425 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 DEFB119Q8N690 84 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 PCDH19Q8TAB3 1148 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 FAF2Q96CS3 445 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 CCDC114Q96M63 670 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 CALN1Q9BXU9 219 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 GOLPH3Q9H4A6 298 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 FBXL12Q9NXK8 326 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 FARP1Q9Y4F1 1045 aaPredicted RBP23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 ALG6Q9Y672 507 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 WDR87Q6ZQQ6 2873 aa23.15■■□□□ 1.3
SFSWAP-204ENST00000535399 PLXND1Q9Y4D7 1925 aa23.14■■□□□ 1.3
SFSWAP-204ENST00000535399 A0A1W2PP55 124 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 NDUFS2O75306 463 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 TMCC1O94876 653 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 KDELR1P24390 212 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 CHRNA3P32297 505 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 DHPSP49366 369 aaPredicted RBP23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 INO80DQ53TQ3 878 aaPredicted RBP23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 CARD16Q5EG05 197 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 ARHGAP36Q6ZRI8 547 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 SLC41A1Q8IVJ1 513 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 MAP7D3Q8IWC1 876 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 TPCN2Q8NHX9 752 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 PIP4K2CQ8TBX8 421 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 CASKIN2Q8WXE0 1202 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 ZNF419Q96HQ0 510 aaPredicted RBP23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 DESI2Q9BSY9 194 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 TM6SF2Q9BZW4 377 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 PCDHGA5Q9Y5G8 931 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 FRYLO94915 3013 aa23.14■■□□□ 1.29
SFSWAP-204ENST00000535399 SPAG17Q6Q759 2223 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 BCLAF3A2AJT9 711 aaKnown RBP23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 DFFAO00273 331 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 SPOPO43791 374 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 TGM1P22735 817 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 ACSL1P33121 698 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 DRD3P35462 400 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 RECQLP46063 649 aaPredicted RBP23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 DNA2P51530 1060 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 CYTH1Q15438 398 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 ANKRD20A8PQ5CZ79 823 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 FAM46CQ5VWP2 391 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 C11orf63Q6NUN7 778 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 ARMCX6Q7L4S7 300 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 KIAA1328Q86T90 577 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 RHOT1Q8IXI2 618 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 HDDC3Q8N4P3 179 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 GANCQ8TET4 914 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 HINFPQ9BQA5 517 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 GPR174Q9BXC1 333 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 BTBD1Q9H0C5 482 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 NEUROG2Q9H2A3 272 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 ARRDC1-AS1Q9H2J1 176 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 PARD6AQ9NPB6 346 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 UBA2Q9UBT2 640 aaPredicted RBP23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 NCKAP1Q9Y2A7 1128 aa23.13■■□□□ 1.29
SFSWAP-204ENST00000535399 A0A0U1RQJ8 604 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 C3orf70A6NLC5 250 aaPredicted RBP23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 C1QTNF3-AMACRE9PGA6 284 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 RNF103O00237 685 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 GSRP00390 522 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 CCNHP51946 323 aaPredicted RBP23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 SFSWAPQ12872 951 aaKnown RBP23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 ZFYVE27Q5T4F4 411 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 LYSMD4Q5XG99 296 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 NCBP2-AS2Q69YL0 99 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 PQLC3Q8N755 202 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 TMIEQ8NEW7 156 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 CADM4Q8NFZ8 388 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 FAM131CQ96AQ9 280 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 CALR3Q96L12 384 aaKnown RBP23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 SGK2Q9HBY8 427 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 IL36AQ9UHA7 158 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 IPO11Q9UI26 975 aaKnown RBP23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 FZD4Q9ULV1 537 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 WASF2Q9Y6W5 498 aa23.12■■□□□ 1.29
SFSWAP-204ENST00000535399 LRRD1A4D1F6 860 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 ZNF487B1APH4 448 aa23.11■■□□□ 1.29
SFSWAP-204ENST00000535399 LRP3O75074 770 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms