RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 SETD4Q9NVD3 440 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 CCDC167Q9P0B6 97 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 TRPC4Q9UBN4 977 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 LEF1Q9UJU2 399 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-236ENST00000533667 RPS6KA6Q9UK32 745 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 WBP11Q9Y2W2 641 aaKnown RBP7.11□□□□□ -1.27
CTNND1-236ENST00000533667 COMMD3-BMI1R4GMX3 469 aa7.11□□□□□ -1.27
CTNND1-236ENST00000533667 ASTN1O14525 1302 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 A0A0B4J269 797 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 RGSL1A5PLK6 1076 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 ANKRD63C9JTQ0 380 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 BTN3A1O00481 513 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 MYL12BO14950 172 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 SNAP91O60641 907 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 SMNDC1O75940 238 aaKnown RBP eCLIP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 TRUB2O95900 331 aaKnown RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 SERPINA6P08185 405 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 GSCP56915 257 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 MFSD10Q14728 455 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 FAM117BQ6P1L5 589 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 POU5F2Q8N7G0 328 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 SOCS4Q8WXH5 440 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 RNF157Q96PX1 679 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 C8orf4Q9NR00 106 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 ARMCX1Q9P291 453 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 PRPF19Q9UMS4 504 aaKnown RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 TRPV2Q9Y5S1 764 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 A0A088AWK7 358 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 C1orf232A0A0U1RR37 186 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 CASTOR2A6NHX0 329 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 TRIM38O00635 465 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 FYNP06241 537 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 SNRPB2P08579 225 aaKnown RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 ERVK-10P10266 1014 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 CCNA2P20248 432 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 ZNF10P21506 573 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 ATN1P54259 1190 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 NR1H2P55055 460 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 SOX10P56693 466 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 CXCL9Q07325 125 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 BCL2L1Q07817 233 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 ACSM2AQ08AH3 577 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 COX10Q12887 443 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 STARD3Q14849 445 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 LY6KQ17RY6 165 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 LYPLAL1Q5VWZ2 237 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 ACSM2BQ68CK6 577 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 NEK10Q6ZWH5 1172 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 KCNK18Q7Z418 384 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 SYTL1Q8IYJ3 562 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 ZNF276Q8N554 614 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 VGLL2Q8N8G2 317 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 LNX1Q8TBB1 728 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 PROX1Q92786 737 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 MCRS1Q96EZ8 462 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 PPP3R2Q96LZ3 170 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 GINS4Q9BRT9 223 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 TKTL2Q9H0I9 626 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 INVSQ9Y283 1065 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 RAP2CQ9Y3L5 183 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 PCDHB12Q9Y5F1 795 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 MAP2P11137 1827 aaKnown RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 KCNK1O00180 336 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 QSOX1O00391 747 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 PDE2AO00408 941 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 CKBP12277 381 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 AKR1A1P14550 325 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 ATP4AP20648 1035 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 ACAT1P24752 427 aaKnown RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 C16orf72Q14CZ0 275 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 NBPF12Q5TAG4 269 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 ARMC3Q5W041 872 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 TXNDC11Q6PKC3 985 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 IKBIPQ70UQ0 350 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 EPHX4Q8IUS5 362 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 PRELID2Q8N945 189 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 MRPL57Q9BQC6 102 aaKnown RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 ROGDIQ9GZN7 287 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 SLITRK2Q9H156 845 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 CLEC4MQ9H2X3 399 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 SNX6Q9UNH7 406 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 EFR3BQ9Y2G0 817 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 UBIAD1Q9Y5Z9 338 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 CASZ1Q86V15 1759 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 TRIM64CA6NLI5 447 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 CATP04040 527 aaKnown RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 ZNF286BP0CG31 522 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 COX4I1P13073 169 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 DRD4P21917 467 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 CES1P23141 567 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 HOXA10P31260 410 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 RPL22P35268 128 aaKnown RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 SKIV2LQ15477 1246 aaKnown RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 HYIQ5T013 277 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 VSIG10LQ86VR7 867 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 DNAAF5Q86Y56 855 aa7.1□□□□□ -1.27
CTNND1-236ENST00000533667 BHLHE22Q8NFJ8 381 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 CENPIQ92674 756 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-236ENST00000533667 SLC39A8Q9C0K1 460 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms