RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ARHGAP20Q9P2F6 1191 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 ZNF212Q9UDV6 495 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 IL36AQ9UHA7 158 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 HPCAL4Q9UM19 191 aa15.78■□□□□ 0.12
CPSF1-211ENST00000533492 SIGLEC16A6NMB1 481 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 TNFSF14O43557 240 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 RNGTTO60942 597 aaKnown RBP15.77■□□□□ 0.12
CPSF1-211ENST00000533492 ITGAVP06756 1048 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 PLEKP08567 350 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-211ENST00000533492 ATXN1LP0C7T5 689 aaKnown RBP15.77■□□□□ 0.12
CPSF1-211ENST00000533492 RHOQP17081 205 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 MAPKAPK2P49137 400 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 ARRB1P49407 418 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-211ENST00000533492 SERPINH1P50454 418 aaKnown RBP15.77■□□□□ 0.12
CPSF1-211ENST00000533492 HDAC4P56524 1084 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.12
CPSF1-211ENST00000533492 FILIP1LQ4L180 1135 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 ARTNQ5T4W7 220 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 DNAJC24Q6P3W2 148 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 SCYL2Q6P3W7 929 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 DPY19L3Q6ZPD9 716 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 APTXQ7Z2E3 356 aaKnown RBP15.77■□□□□ 0.12
CPSF1-211ENST00000533492 PCDH20Q8N6Y1 951 aaKnown RBP15.77■□□□□ 0.12
CPSF1-211ENST00000533492 KDF1Q8NAX2 398 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-211ENST00000533492 BAHD1Q8TBE0 780 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-211ENST00000533492 GRIN3AQ8TCU5 1115 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 CENPIQ92674 756 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-211ENST00000533492 ARRDC3Q96B67 414 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 TBC1D31Q96DN5 1066 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 TMEM121BQ9BXQ6 578 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-211ENST00000533492 CEP44Q9C0F1 390 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 HSD3B7Q9H2F3 369 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 TMEM63CQ9P1W3 806 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 DNAI1Q9UI46 699 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 ZMIZ1Q9ULJ6 1067 aa15.77■□□□□ 0.12
CPSF1-211ENST00000533492 KMT2BQ9UMN6 2715 aaPredicted RBP15.77■□□□□ 0.11
CPSF1-211ENST00000533492 FAM221BA6H8Z2 402 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 FAM72CH0Y354 149 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 PRAMEF26H0Y7S4 382 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 YKT6O15498 198 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 LEFTY1O75610 366 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 ZMPSTE24O75844 475 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 LRIG2O94898 1065 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 DESP17661 470 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 TNFAIP3P21580 790 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 ACVRL1P37023 503 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 GEMIN4P57678 1058 aaKnown RBP15.76■□□□□ 0.11
CPSF1-211ENST00000533492 NXPH1P58417 271 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 TAS2R38P59533 333 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 ARF5P84085 180 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 CCDC157Q569K6 752 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 CARD16Q5EG05 197 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 PIP5KL1Q5T9C9 394 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 FAM72AQ5TYM5 149 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 ACAD10Q6JQN1 1059 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 FAM72DQ6L9T8 149 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 NEK5Q6P3R8 708 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 DCUN1D2Q6PH85 259 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 ERN2Q76MJ5 926 aaKnown RBP15.76■□□□□ 0.11
CPSF1-211ENST00000533492 SLFN11Q7Z7L1 901 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 FAM72BQ86X60 149 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 GATAD2AQ86YP4 633 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 OXR1Q8N573 874 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 CCDC185Q8N715 623 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 NTAN1Q96AB6 310 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 HEPHQ9BQS7 1158 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 MAGEB5Q9BZ81 275 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 MAGEH1Q9H213 219 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 TMEM248Q9NWD8 314 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 FTSJ1Q9UET6 329 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 FRYQ5TBA9 3013 aa15.76■□□□□ 0.11
CPSF1-211ENST00000533492 USP24Q9UPU5 2620 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 A0A1W2PQU0 124 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 SLC31A1O15431 190 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 TEX33O43247 280 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 RAMP2O60895 175 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 PCDH8O95206 1070 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 ZNF143P52747 638 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-211ENST00000533492 OVGP1Q12889 678 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 POLD3Q15054 466 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-211ENST00000533492 EFHC2Q5JST6 749 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 MANEALQ5VSG8 457 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 MON1BQ7L1V2 547 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 IQCHQ86VS3 1027 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 NLRP14Q86W24 1093 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 ZNF354CQ86Y25 554 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 RYBPQ8N488 228 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-211ENST00000533492 ZCCHC14Q8WYQ9 949 aaKnown RBP15.75■□□□□ 0.11
CPSF1-211ENST00000533492 KLK6Q92876 244 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 ARHGEF2Q92974 986 aaKnown RBP15.75■□□□□ 0.11
CPSF1-211ENST00000533492 KLHDC7BQ96G42 594 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 MCEEQ96PE7 176 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 BPIFA3Q9BQP9 254 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 HDAC8Q9BY41 377 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 ERVMER34-1Q9H9K5 563 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 NDFIP2Q9NV92 336 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 HECAQ9UBI9 543 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-211ENST00000533492 FCF1Q9Y324 198 aaKnown RBP15.75■□□□□ 0.11
CPSF1-211ENST00000533492 DOCK9Q9BZ29 2069 aa15.75■□□□□ 0.11
CPSF1-211ENST00000533492 TP53BP1Q12888 1972 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms