RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 FAM98BQ52LJ0 330 aaKnown RBP14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 LRRC38Q5VT99 294 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 GET4Q7L5D6 327 aaPredicted RBP14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 SRLQ86TD4 932 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 LRRC52Q8N7C0 313 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 CXorf40BQ96DE9 158 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 RPRD1BQ9NQG5 326 aaKnown RBP14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 ETNK2Q9NVF9 386 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 ZNF510Q9Y2H8 683 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 SOWAHBA6NEL2 793 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 XPO1O14980 1071 aaKnown RBP14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 HS6ST1O60243 411 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 NAA20P61599 178 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 ADRM1Q16186 407 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 PCID2Q5JVF3 399 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 FGD2Q7Z6J4 655 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 FAM124AQ86V42 546 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 ZNF786Q8N393 782 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 MIR1-1HGQ9H1L0 117 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 NOS3P29474 1203 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 CYP20A1Q6UW02 462 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 LRRC55Q6ZSA7 311 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 AMIGO3Q86WK7 504 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 GPSM1Q86YR5 675 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 NSMCE2Q96MF7 247 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 TMEM120AQ9BXJ8 343 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 TRMT13Q9NUP7 481 aaKnown RBP14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 DLG5Q8TDM6 1919 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 SMIM35A0A1B0GVV1 85 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 NUDT14O95848 222 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 NTSP30990 170 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 RASA2Q15283 850 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 LUZP2Q86TE4 346 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 FAM126BQ8IXS8 530 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 SPPL2AQ8TCT8 520 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 CDHR5Q9HBB8 845 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 NDUFAF1Q9Y375 327 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 PIRTP0C851 137 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 CTPS1P17812 591 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 GALNT3Q14435 633 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 LBX2Q6XYB7 198 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 POMGNT2Q8NAT1 580 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 KYQ8NBH2 561 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 APOPT1Q96IL0 206 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 ANKZF1Q9H8Y5 726 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 ADPRHL2Q9NX46 363 aa14.97□□□□□ -0.01
PCDHA9-202ENST00000532602 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 MSI1O43347 362 aaKnown RBP14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 GLUD1P00367 558 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 ERBB2P04626 1255 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 FGRP09769 529 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 LAG3P18627 525 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 CES1P23141 567 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 ZNF143P52747 638 aaPredicted RBP14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 PFKPQ01813 784 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 TRAF2Q12933 501 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 ARHGAP17Q68EM7 881 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 PSTKQ8IV42 348 aaKnown RBP14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 ZMAT2Q96NC0 199 aaKnown RBP14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 B3GNT5Q9BYG0 378 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 GNPTGQ9UJJ9 305 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 PADI3Q9ULW8 664 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 POLR1DQ9Y2S0 133 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 A0A1W2PQH9 124 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 OPLAHO14841 1288 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 GABRR2P28476 465 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 SOX6P35712 828 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 IFNGR2P38484 337 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 MRPS35P82673 323 aaKnown RBP14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 FMO1Q01740 532 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 CRYMQ14894 314 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 SLC41A1Q8IVJ1 513 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 CNBD2Q96M20 576 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 THAP1Q9NVV9 213 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 NINJ2Q9NZG7 142 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 COL1A2P08123 1366 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 A0A0A0MRY4 1105 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 MDM4O15151 490 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 INHAP05111 366 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 RPL7AP62424 266 aaKnown RBP14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 IRF8Q02556 426 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 TTC7BQ86TV6 843 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 SPATA13Q96N96 652 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 GPR1P46091 355 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 PURAQ00577 322 aaKnown RBP14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 SPIDRQ14159 915 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 VN1R5Q7Z5H4 357 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 TMEM132CQ8N3T6 1108 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 OR6K2Q8NGY2 324 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 PPP1R14AQ96A00 147 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 DNAJC1Q96KC8 554 aaKnown RBP14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 SLC28A3Q9HAS3 691 aa14.96□□□□□ -0.01
PCDHA9-202ENST00000532602 A0A0G2JLL6 359 aaPredicted RBP14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 TGFB1I1O43294 461 aa14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 SLC1A6P48664 564 aa14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 SMAD3P84022 425 aaKnown RBP14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 DSG1Q02413 1049 aa14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 FUT2Q10981 343 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms