RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 ACACBO00763 2458 aa17.6■□□□□ 0.41
PHRF1-204ENST00000532550 CXorf51AA0A1B0GTR3 108 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 SPAARA0A1B0GVQ0 90 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 PLRG1O43660 514 aaKnown RBP17.59■□□□□ 0.41
PHRF1-204ENST00000532550 CREB3O43889 395 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 RAMP2O60895 175 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 CTSLP07711 333 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 SKILP12757 684 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 EPHB2P29323 1055 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 ACVRL1P37023 503 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 SERPINH1P50454 418 aaKnown RBP17.59■□□□□ 0.41
PHRF1-204ENST00000532550 GEMIN4P57678 1058 aaKnown RBP17.59■□□□□ 0.41
PHRF1-204ENST00000532550 ARF5P84085 180 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 FOXC1Q12948 553 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 POLD3Q15054 466 aaPredicted RBP17.59■□□□□ 0.41
PHRF1-204ENST00000532550 TRIP6Q15654 476 aaKnown RBP17.59■□□□□ 0.41
PHRF1-204ENST00000532550 SLC45A4Q5BKX6 768 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 ARSIQ5FYB1 569 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 FIGNQ5HY92 759 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 PLEKHA7Q6IQ23 1121 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 TMC6Q7Z403 805 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 ZNF354CQ86Y25 554 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 NAXDQ8IW45 347 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 PYROXD2Q8N2H3 581 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 PCDH20Q8N6Y1 951 aaKnown RBP17.59■□□□□ 0.41
PHRF1-204ENST00000532550 ARHGEF2Q92974 986 aaKnown RBP17.59■□□□□ 0.41
PHRF1-204ENST00000532550 SERAC1Q96JX3 654 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 SLC6A18Q96N87 628 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 CAMK1GQ96NX5 476 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 EPAS1Q99814 870 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 TTYH3Q9C0H2 523 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 IL36AQ9UHA7 158 aa17.59■□□□□ 0.41
PHRF1-204ENST00000532550 FNDC3AQ9Y2H6 1198 aaKnown RBP17.59■□□□□ 0.41
PHRF1-204ENST00000532550 KCNK3O14649 394 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 VILLO15195 856 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 DFNA5O60443 496 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 PSMA2P25787 234 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 CD38P28907 300 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 NUDT1P36639 197 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 SHC2P98077 582 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 CARD16Q5EG05 197 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 AGBL4Q5VU57 503 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 LAYNQ6UX15 382 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 DPY19L3Q6ZPD9 716 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 CHST14Q8NCH0 376 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 PPP1R16AQ96I34 528 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 HEPHQ9BQS7 1158 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 CATSPERBQ9H7T0 1116 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 FCF1Q9Y324 198 aaKnown RBP17.58■□□□□ 0.4
PHRF1-204ENST00000532550 PCDHGB2Q9Y5G2 931 aa17.58■□□□□ 0.4
PHRF1-204ENST00000532550 C10orf142B7Z368 130 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 DDX3XO00571 662 aaKnown RBP eCLIP17.57■□□□□ 0.4
PHRF1-204ENST00000532550 LATO43561 262 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 ZNF821O75541 412 aaPredicted RBP17.57■□□□□ 0.4
PHRF1-204ENST00000532550 RNF8O76064 485 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 MAT2AP31153 395 aaKnown RBP17.57■□□□□ 0.4
PHRF1-204ENST00000532550 CTSKP43235 329 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 PPP2CBP62714 309 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 PPP2CAP67775 309 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 FAM193AP78312 1265 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 OGDHQ02218 1023 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 ZSCAN23Q3MJ62 389 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 E4F1Q66K89 784 aaPredicted RBP17.57■□□□□ 0.4
PHRF1-204ENST00000532550 RYBPQ8N488 228 aaPredicted RBP17.57■□□□□ 0.4
PHRF1-204ENST00000532550 GRIN3AQ8TCU5 1115 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 RHBDD1Q8TEB9 315 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 CPLX3Q8WVH0 158 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 ISG20Q96AZ6 181 aaKnown RBP17.57■□□□□ 0.4
PHRF1-204ENST00000532550 PREBQ9HCU5 417 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 HECAQ9UBI9 543 aaPredicted RBP17.57■□□□□ 0.4
PHRF1-204ENST00000532550 CNOT8Q9UFF9 292 aaKnown RBP17.57■□□□□ 0.4
PHRF1-204ENST00000532550 BZW2Q9Y6E2 419 aaKnown RBP17.57■□□□□ 0.4
PHRF1-204ENST00000532550 DOCK9Q9BZ29 2069 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 CHD5Q8TDI0 1954 aa17.57■□□□□ 0.4
PHRF1-204ENST00000532550 PLXNA2O75051 1894 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 A0A1W2PQJ5 194 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 TMEM191CA6NGB0 347 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 ATMINO43313 823 aaPredicted RBP17.56■□□□□ 0.4
PHRF1-204ENST00000532550 KDELR3O43731 214 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 LEFTY1O75610 366 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 CD160O95971 181 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 STAT4Q14765 748 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 ZNF423Q2M1K9 1284 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 SETMARQ53H47 684 aaPredicted RBP17.56■□□□□ 0.4
PHRF1-204ENST00000532550 TDRD12Q587J7 1177 aaKnown RBP17.56■□□□□ 0.4
PHRF1-204ENST00000532550 KCNT1Q5JUK3 1230 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 PIP5KL1Q5T9C9 394 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 NAPEPLDQ6IQ20 393 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 NEK5Q6P3R8 708 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 DBX2Q6ZNG2 339 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 ERN2Q76MJ5 926 aaKnown RBP17.56■□□□□ 0.4
PHRF1-204ENST00000532550 TRIM69Q86WT6 500 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 DNAAF5Q86Y56 855 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 PLPP6Q8IY26 295 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 RTL3Q8N8U3 475 aaKnown RBP17.56■□□□□ 0.4
PHRF1-204ENST00000532550 SYN2Q92777 582 aaPredicted RBP17.56■□□□□ 0.4
PHRF1-204ENST00000532550 ARRDC3Q96B67 414 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 ZNF653Q96CK0 615 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 IQCDQ96DY2 449 aa17.56■□□□□ 0.4
PHRF1-204ENST00000532550 TRIM11Q96F44 468 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms