RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 VAV1P15498 845 aa22.69■■□□□ 1.22
LRRK1-208ENST00000532029 GARSP41250 739 aaKnown RBP22.69■■□□□ 1.22
LRRK1-208ENST00000532029 PXNP49023 591 aaPredicted RBP22.69■■□□□ 1.22
LRRK1-208ENST00000532029 RFTN1Q14699 578 aaPredicted RBP22.69■■□□□ 1.22
LRRK1-208ENST00000532029 ZNF528Q3MIS6 628 aa22.69■■□□□ 1.22
LRRK1-208ENST00000532029 SEL1L2Q5TEA6 688 aa22.69■■□□□ 1.22
LRRK1-208ENST00000532029 NPNTQ6UXI9 565 aa22.69■■□□□ 1.22
LRRK1-208ENST00000532029 BBS12Q6ZW61 710 aa22.69■■□□□ 1.22
LRRK1-208ENST00000532029 OR8D1Q8WZ84 308 aa22.69■■□□□ 1.22
LRRK1-208ENST00000532029 ISG20Q96AZ6 181 aaKnown RBP22.69■■□□□ 1.22
LRRK1-208ENST00000532029 ZNF599Q96NL3 588 aa22.69■■□□□ 1.22
LRRK1-208ENST00000532029 FAM126AQ9BYI3 521 aaPredicted RBP22.69■■□□□ 1.22
LRRK1-208ENST00000532029 TNKS2Q9H2K2 1166 aa22.69■■□□□ 1.22
LRRK1-208ENST00000532029 MYO18AQ92614 2054 aaKnown RBP22.69■■□□□ 1.22
LRRK1-208ENST00000532029 AXIN1O15169 862 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 MAFKO60675 156 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 TJP3O95049 919 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 SP9P0CG40 484 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 TDGF1P13385 188 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 GABRG2P18507 467 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 NDUFV2P19404 249 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 NR2C2P49116 596 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 RHOAP61586 193 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 SLC10A2Q12908 348 aaPredicted RBP22.68■■□□□ 1.22
LRRK1-208ENST00000532029 ELAVL3Q14576 367 aaKnown RBP22.68■■□□□ 1.22
LRRK1-208ENST00000532029 PDK1Q15118 436 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 TMCO4Q5TGY1 634 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 TIGD7Q6NT04 549 aaPredicted RBP22.68■■□□□ 1.22
LRRK1-208ENST00000532029 AADACL2Q6P093 401 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 KIAA1324Q6UXG2 1013 aaKnown RBP22.68■■□□□ 1.22
LRRK1-208ENST00000532029 DSG4Q86SJ6 1040 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 RASSF3Q86WH2 238 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 TMPRSS6Q8IU80 811 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 STK40Q8N2I9 435 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 CCNYQ8ND76 341 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 MDGA1Q8NFP4 955 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 PRCCQ92733 491 aaPredicted RBP22.68■■□□□ 1.22
LRRK1-208ENST00000532029 P3H4Q92791 437 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 EBF1Q9UH73 591 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 JRKLQ9Y4A0 524 aa22.68■■□□□ 1.22
LRRK1-208ENST00000532029 NYNRINQ9P2P1 1898 aaKnown RBP22.67■■□□□ 1.22
LRRK1-208ENST00000532029 CCDC163A0A0D9SF12 145 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 PPP1R12AO14974 1030 aaPredicted RBP22.67■■□□□ 1.22
LRRK1-208ENST00000532029 FNTBP49356 437 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 COPAP53621 1224 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 SNRPD1P62314 119 aaKnown RBP22.67■■□□□ 1.22
LRRK1-208ENST00000532029 CARD16Q5EG05 197 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 DCAF12L1Q5VU92 463 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 ZNF776Q68DI1 518 aaPredicted RBP22.67■■□□□ 1.22
LRRK1-208ENST00000532029 LONP2Q86WA8 852 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 SLC35F6Q8N357 371 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 BBS5Q8N3I7 341 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 HDAC11Q96DB2 347 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 TRIM44Q96DX7 344 aaPredicted RBP22.67■■□□□ 1.22
LRRK1-208ENST00000532029 SIPA1Q96FS4 1042 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 MRGPRX1Q96LB2 322 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 TSGA13Q96PP4 275 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 CINPQ9BW66 212 aaPredicted RBP22.67■■□□□ 1.22
LRRK1-208ENST00000532029 TM6SF2Q9BZW4 377 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 KCNH6Q9H252 994 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 HCN4Q9Y3Q4 1203 aa22.67■■□□□ 1.22
LRRK1-208ENST00000532029 KCNK3O14649 394 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 ALOX15BO15296 676 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 IGSF6O95976 241 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 GSRP00390 522 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 CCNCP24863 283 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 ADCY2Q08462 1091 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 DMWDQ09019 674 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 LBRQ14739 615 aaKnown RBP22.66■■□□□ 1.22
LRRK1-208ENST00000532029 CYTH1Q15438 398 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 WDR5BQ86VZ2 330 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 CACUL1Q86Y37 369 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 RYBPQ8N488 228 aaPredicted RBP22.66■■□□□ 1.22
LRRK1-208ENST00000532029 PRSS33Q8NF86 280 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 OR2A12Q8NGT7 310 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 HAUS1Q96CS2 278 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 GDAP1L1Q96MZ0 367 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 TLR10Q9BXR5 811 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 TPSD1Q9BZJ3 242 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 MKRN2Q9H000 416 aaKnown RBP22.66■■□□□ 1.22
LRRK1-208ENST00000532029 BRD8Q9H0E9 1235 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 SLC6A17Q9H1V8 727 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 RSPH9Q9H1X1 276 aaPredicted RBP22.66■■□□□ 1.22
LRRK1-208ENST00000532029 CARD9Q9H257 536 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 ZSCAN32Q9NX65 697 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 SAE1Q9UBE0 346 aaPredicted RBP22.66■■□□□ 1.22
LRRK1-208ENST00000532029 SEPT3Q9UH03 358 aa22.66■■□□□ 1.22
LRRK1-208ENST00000532029 CKAP5Q14008 2032 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 NUP205Q92621 2012 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 APOC4-APOC2K7ER74 178 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 MCF2LO15068 1137 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 ZNF821O75541 412 aaPredicted RBP22.65■■□□□ 1.22
LRRK1-208ENST00000532029 APOC2P02655 101 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 ACADMP11310 421 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 PECAM1P16284 738 aaPredicted RBP22.65■■□□□ 1.22
LRRK1-208ENST00000532029 RPS14P62263 151 aaKnown RBP22.65■■□□□ 1.22
LRRK1-208ENST00000532029 ZNF235Q14590 738 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 PLPP6Q8IY26 295 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 CCDC13Q8IYE1 715 aa22.65■■□□□ 1.22
LRRK1-208ENST00000532029 OR2AP1Q8NGE2 309 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms