RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 UNC5DQ6UXZ4 953 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 RBM43Q6ZSC3 357 aaKnown RBP5.83□□□□□ -1.48
CD44-231ENST00000531110 RAPH1Q70E73 1250 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 UNC13DQ70J99 1090 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 ANO5Q75V66 913 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 CACNA2D4Q7Z3S7 1137 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 MICU3Q86XE3 530 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 SPATA2LQ8IUW3 424 aaPredicted RBP5.83□□□□□ -1.48
CD44-231ENST00000531110 CADM3Q8N126 398 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 SLC44A3Q8N4M1 653 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 OR7G1Q8NGA0 311 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 MYCBPAPQ8TBZ2 947 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 OTUD7AQ8TE49 926 aaPredicted RBP5.83□□□□□ -1.48
CD44-231ENST00000531110 LPIN2Q92539 896 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 SGK3Q96BR1 496 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 ARL5BQ96KC2 179 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 OLFM3Q96PB7 478 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 SECISBP2Q96T21 854 aaKnown RBP5.83□□□□□ -1.48
CD44-231ENST00000531110 CENPKQ9BS16 269 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 DESI2Q9BSY9 194 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 MRPL9Q9BYD2 267 aaKnown RBP5.83□□□□□ -1.48
CD44-231ENST00000531110 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.83□□□□□ -1.48
CD44-231ENST00000531110 STMN4Q9H169 189 aaPredicted RBP5.83□□□□□ -1.48
CD44-231ENST00000531110 ACAD9Q9H845 621 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 UCK1Q9HA47 277 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 KIAA1586Q9HCI6 787 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 TRIM10Q9UDY6 481 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 KIAA1257Q9ULG3 409 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 HECW1Q76N89 1606 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 WDR7Q9Y4E6 1490 aa5.83□□□□□ -1.48
CD44-231ENST00000531110 BCL9O00512 1426 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 NUP155O75694 1391 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 MAP3K19Q56UN5 1328 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 MACROD2A1Z1Q3 448 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 WDR91A4D1P6 747 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 LACTBL1A8MY62 500 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 AKR1B15C9JRZ8 316 aaPredicted RBP5.82□□□□□ -1.48
CD44-231ENST00000531110 E7EVH7 732 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 H3BQV1 296 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 TRDMT1O14717 391 aaKnown RBP5.82□□□□□ -1.48
CD44-231ENST00000531110 AREL1O15033 823 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 FIBPO43427 364 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 SERPINB7O75635 380 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 BRAFP15056 766 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 PRLRP16471 622 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 ATP6V1C1P21283 382 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 PRKACBP22694 351 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 CFL1P23528 166 aaKnown RBP5.82□□□□□ -1.48
CD44-231ENST00000531110 STAT6P42226 847 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 POLD2P49005 469 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 RGS7P49802 495 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 SUMO3P55854 103 aaPredicted RBP5.82□□□□□ -1.48
CD44-231ENST00000531110 CYP4F2P78329 520 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 COL10A1Q03692 680 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 CASP8Q14790 479 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 ZNF169Q14929 603 aaPredicted RBP5.82□□□□□ -1.48
CD44-231ENST00000531110 MGAT5BQ3V5L5 792 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 LEXMQ3ZCV2 418 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 ANO1Q5XXA6 986 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 PLBD1Q6P4A8 553 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 TMEM108Q6UXF1 575 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 ZNF600Q6ZNG1 722 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 TAOK1Q7L7X3 1001 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 DTX2Q86UW9 622 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 COL23A1Q86Y22 540 aaPredicted RBP5.82□□□□□ -1.48
CD44-231ENST00000531110 SPICE1Q8N0Z3 855 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.82□□□□□ -1.48
CD44-231ENST00000531110 SLC15A4Q8N697 577 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 OR52K2Q8NGK3 314 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 SEPT8Q92599 483 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 TIFAQ96CG3 184 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 PBKQ96KB5 322 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 ART5Q96L15 291 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 COG8Q96MW5 612 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 STRBPQ96SI9 672 aaKnown RBP5.82□□□□□ -1.48
CD44-231ENST00000531110 KRTAP4-2Q9BYR5 136 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 TPSD1Q9BZJ3 242 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 API5Q9BZZ5 524 aaKnown RBP5.82□□□□□ -1.48
CD44-231ENST00000531110 IKZF4Q9H2S9 585 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 HAUS4Q9H6D7 363 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 SCPEP1Q9HB40 452 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 ZNF287Q9HBT7 754 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 SH3GLB2Q9NR46 395 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 INIPQ9NRY2 104 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 GIN1Q9NXP7 522 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 STK32BQ9NY57 414 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 TAS2R7Q9NYW3 318 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 LRIT1Q9P2V4 623 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 ZNHIT2Q9UHR6 403 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 TEKT2Q9UIF3 430 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 OGDHLQ9ULD0 1010 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 SH2B3Q9UQQ2 575 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 CNPY2Q9Y2B0 182 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 LMTK2Q8IWU2 1503 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 NAIPQ13075 1403 aa5.82□□□□□ -1.48
CD44-231ENST00000531110 PARD3Q8TEW0 1356 aa5.81□□□□□ -1.48
CD44-231ENST00000531110 GRIN2DO15399 1336 aa5.81□□□□□ -1.48
CD44-231ENST00000531110 TTC21BQ7Z4L5 1316 aa5.81□□□□□ -1.48
CD44-231ENST00000531110 SMIM31A0A1B0GVY4 71 aa5.81□□□□□ -1.48
CD44-231ENST00000531110 DPPA5A6NC42 116 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms