RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 FAM133BQ5BKY9 247 aaKnown RBP8.75□□□□□ -1.01
SSBP3-212ENST00000528930 C10orf76Q5T2E6 689 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 ADGRF1Q5T601 910 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 EGFLAMQ63HQ2 1017 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 FOXR1Q6PIV2 292 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 OLFML1Q6UWY5 402 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 FAM183BPQ6ZVS7 135 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 NOP9Q86U38 636 aaKnown RBP8.75□□□□□ -1.01
SSBP3-212ENST00000528930 TAC4Q86UU9 113 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 ZC3H18Q86VM9 953 aaKnown RBP8.75□□□□□ -1.01
SSBP3-212ENST00000528930 UNC45BQ8IWX7 931 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 PGBD3Q8N328 593 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 ZCCHC9Q8N567 271 aaKnown RBP8.75□□□□□ -1.01
SSBP3-212ENST00000528930 AOPEPQ8N6M6 819 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 GOLGA1Q92805 767 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 AZIN2Q96A70 460 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 SLC2A13Q96QE2 648 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 ACOX2Q99424 681 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 POPDC2Q9HBU9 364 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 CD248Q9HCU0 757 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 ASNSD1Q9NWL6 643 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 TLR6Q9Y2C9 796 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 SLC27A6Q9Y2P4 619 aa8.75□□□□□ -1.01
SSBP3-212ENST00000528930 SDK2Q58EX2 2172 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 GOLGA6L7A0A1B0GV03 622 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 LGALS16A8MUM7 142 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 ENC1O14682 589 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 IRAK2O43187 625 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 ACSL4O60488 711 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 PPFIA2O75334 1257 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 ZNF217O75362 1048 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 TRUB2O95900 331 aaKnown RBP8.74□□□□□ -1.01
SSBP3-212ENST00000528930 GLI1P08151 1106 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 CDK11BP21127 795 aaKnown RBP8.74□□□□□ -1.01
SSBP3-212ENST00000528930 HOXD9P28356 352 aaPredicted RBP8.74□□□□□ -1.01
SSBP3-212ENST00000528930 GABRB2P47870 512 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 SGSHP51688 502 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 POLR2FP61218 127 aaKnown RBP8.74□□□□□ -1.01
SSBP3-212ENST00000528930 SLC6A3Q01959 620 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 IQCB1Q15051 598 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 SYCP1Q15431 976 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 KLHL40Q2TBA0 621 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 ARL13BQ3SXY8 428 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 FKBP15Q5T1M5 1219 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 PIK3R6Q5UE93 754 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 TAF3Q5VWG9 929 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 NUGGCQ68CJ6 796 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 TMEM215Q68D42 235 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 NADSYN1Q6IA69 706 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 SRRM1Q8IYB3 904 aaKnown RBP8.74□□□□□ -1.01
SSBP3-212ENST00000528930 DEFB106AQ8N104 65 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 DDI1Q8WTU0 396 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 TMA16Q96EY4 203 aaKnown RBP8.74□□□□□ -1.01
SSBP3-212ENST00000528930 MYEOVQ96EZ4 313 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 NAP1L5Q96NT1 182 aaPredicted RBP8.74□□□□□ -1.01
SSBP3-212ENST00000528930 SERPINB11Q96P15 392 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 ERGIC2Q96RQ1 377 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 GRPEL1Q9HAV7 217 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 NLRC4Q9NPP4 1024 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 ASCL3Q9NQ33 180 aa8.74□□□□□ -1.01
SSBP3-212ENST00000528930 FAM207AQ9NSI2 230 aaPredicted RBP8.74□□□□□ -1.01
SSBP3-212ENST00000528930 PLXNA2O75051 1894 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 A0A1W2PQF6 199 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 WASH3PC4AMC7 463 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 BCAT2O15382 392 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-212ENST00000528930 TEX33O43247 280 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 HSF2BPO75031 334 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 GRAP2O75791 330 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 GFPT2O94808 682 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 CYBBP04839 570 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 MMEP08473 750 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 FAM87AP0C7U9 286 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 CHRNB2P17787 502 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 GLDCP23378 1020 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 HLA-FP30511 346 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 NTSR1P30989 418 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 SOX5P35711 763 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 WASP42768 502 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 ZNF445P59923 1031 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 UBXN1Q04323 297 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 ENPP2Q13822 863 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 INAVAQ3KP66 663 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 DCAF6Q58WW2 860 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 ZC3H12AQ5D1E8 599 aaKnown RBP8.73□□□□□ -1.01
SSBP3-212ENST00000528930 EFHC1Q5JVL4 640 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 OR6B2Q6IFH4 312 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 RFWD3Q6PCD5 774 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 CCDC81Q6ZN84 652 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 SLC26A9Q7LBE3 791 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 TRMT11Q7Z4G4 463 aaKnown RBP8.73□□□□□ -1.01
SSBP3-212ENST00000528930 KIAA0907Q7Z7F0 614 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-212ENST00000528930 TMEM35BQ8NCS4 154 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 ANKRD20A12PQ8NF67 263 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 ZNF397Q8NF99 534 aaPredicted RBP8.73□□□□□ -1.01
SSBP3-212ENST00000528930 C1orf216Q8TAB5 229 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 WFDC5Q8TCV5 224 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 SLC20A1Q8WUM9 679 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 NOX5Q96PH1 765 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 GABRG3Q99928 467 aa8.73□□□□□ -1.01
SSBP3-212ENST00000528930 TRIM62Q9BVG3 475 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms