RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 SOWAHAQ2M3V2 549 aa13.26□□□□□ -0.29
RBM39-243ENST00000528062 HEATR6Q6AI08 1181 aaKnown RBP13.26□□□□□ -0.29
RBM39-243ENST00000528062 AAGABQ6PD74 315 aa13.26□□□□□ -0.29
RBM39-243ENST00000528062 CES3Q6UWW8 571 aa13.26□□□□□ -0.29
RBM39-243ENST00000528062 COLGALT1Q8NBJ5 622 aa13.26□□□□□ -0.29
RBM39-243ENST00000528062 OR6Y1Q8NGX8 325 aa13.26□□□□□ -0.29
RBM39-243ENST00000528062 ACMSDQ8TDX5 336 aa13.26□□□□□ -0.29
RBM39-243ENST00000528062 TFB1MQ8WVM0 346 aaKnown RBP13.26□□□□□ -0.29
RBM39-243ENST00000528062 PPP2R3CQ969Q6 453 aa13.26□□□□□ -0.29
RBM39-243ENST00000528062 UROC1Q96N76 676 aa13.26□□□□□ -0.29
RBM39-243ENST00000528062 OLFM3Q96PB7 478 aa13.26□□□□□ -0.29
RBM39-243ENST00000528062 FAM193BQ96PV7 902 aaPredicted RBP13.26□□□□□ -0.29
RBM39-243ENST00000528062 SIKE1Q9BRV8 207 aa13.26□□□□□ -0.29
RBM39-243ENST00000528062 KIAA1257Q9ULG3 409 aa13.26□□□□□ -0.29
RBM39-243ENST00000528062 USP3Q9Y6I4 520 aa13.26□□□□□ -0.29
RBM39-243ENST00000528062 COL4A4P53420 1690 aaPredicted RBP13.26□□□□□ -0.29
RBM39-243ENST00000528062 KLHL2O95198 593 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 GOT1P17174 413 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 ASPHQ12797 758 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 BSPRYQ5W0U4 402 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 AP1ARQ63HQ0 302 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 LIMS2Q7Z4I7 341 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 RNF168Q8IYW5 571 aaPredicted RBP13.25□□□□□ -0.29
RBM39-243ENST00000528062 SLC39A11Q8N1S5 342 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 SLC26A7Q8TE54 656 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 HTR3CQ8WXA8 447 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 GPR62Q9BZJ7 368 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 FAM192AQ9GZU8 254 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 STN1Q9H668 368 aaKnown RBP13.25□□□□□ -0.29
RBM39-243ENST00000528062 ZDHHC7Q9NXF8 308 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 CDH22Q9UJ99 828 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 XIRP2A4UGR9 3374 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 A0A0A0MRY4 1105 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 LOC100653049A0A140TA62 436 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 KPNA7A9QM74 516 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 KRT34O76011 436 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 ALOX15P16050 662 aaPredicted RBP13.25□□□□□ -0.29
RBM39-243ENST00000528062 ITGAXP20702 1163 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 PEX2P28328 305 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 NR2C2P49116 596 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 TAF6P49848 677 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 OLIG2Q13516 323 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 PDPK2PQ6A1A2 396 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 DCLRE1AQ6PJP8 1040 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 FRMD7Q6ZUT3 714 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 RASSF3Q86WH2 238 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 HPS6Q86YV9 775 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 FIBCD1Q8N539 461 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 HIPK4Q8NE63 616 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 ACTRT2Q8TDY3 377 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 CENPIQ92674 756 aaPredicted RBP13.25□□□□□ -0.29
RBM39-243ENST00000528062 SPATA13Q96N96 652 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 C17orf80Q9BSJ5 609 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 TRIM4Q9C037 500 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 DPEP3Q9H4B8 488 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 DNAJC28Q9NX36 388 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 SYBUQ9NX95 663 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 GDAP2Q9NXN4 497 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 COPG2Q9UBF2 871 aa13.25□□□□□ -0.29
RBM39-243ENST00000528062 SPTBN5Q9NRC6 3674 aaKnown RBP13.24□□□□□ -0.29
RBM39-243ENST00000528062 ZBTB14O43829 449 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 ERVK-10P10266 1014 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 PTPN9P43378 593 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 AQP4P55087 323 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 ITGA9Q13797 1035 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 RBBP5Q15291 538 aaKnown RBP13.24□□□□□ -0.29
RBM39-243ENST00000528062 TCHHL1Q5QJ38 904 aaPredicted RBP13.24□□□□□ -0.29
RBM39-243ENST00000528062 LRRC8BQ6P9F7 803 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 ACAD11Q709F0 780 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 TAS1R1Q7RTX1 841 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 CMC1Q7Z7K0 106 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 KBTBD7Q8WVZ9 684 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 IGSF21Q96ID5 467 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 B3GALT6Q96L58 329 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 ADAM28Q9UKQ2 775 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 COLQQ9Y215 455 aaPredicted RBP13.24□□□□□ -0.29
RBM39-243ENST00000528062 POMPQ9Y244 141 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 TBC1D30Q9Y2I9 924 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 SNX9Q9Y5X1 595 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 SF3B1O75533 1304 aaKnown RBP eCLIP13.24□□□□□ -0.299e-7■■□□□ 13.4
RBM39-243ENST00000528062 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.24□□□□□ -0.29
RBM39-243ENST00000528062 M0QZQ0 153 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 MFSD11O43934 449 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 ALDH2P05091 517 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 MLNP12872 115 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 GSTT1P30711 240 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 GRIA2P42262 883 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 HARS2P49590 506 aaKnown RBP13.24□□□□□ -0.29
RBM39-243ENST00000528062 ABCE1P61221 599 aaKnown RBP13.24□□□□□ -0.29
RBM39-243ENST00000528062 USP4Q13107 963 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 CNPY1Q3B7I2 92 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 DEFB107AQ8IZN7 70 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 ZNF560Q96MR9 790 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 MAN1C1Q9NR34 630 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 TMPRSS4Q9NRS4 437 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 DCDC2Q9UHG0 476 aa13.24□□□□□ -0.29
RBM39-243ENST00000528062 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.23□□□□□ -0.29
RBM39-243ENST00000528062 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.23□□□□□ -0.29
RBM39-243ENST00000528062 H3BNX3 289 aa13.23□□□□□ -0.29
RBM39-243ENST00000528062 RNF103O00237 685 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms