RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 THAP2Q9H0W7 228 aa26.9■■□□□ 1.9
TSPAN4-217ENST00000527644 TNKS2Q9H2K2 1166 aa26.9■■□□□ 1.9
TSPAN4-217ENST00000527644 KDM4CQ9H3R0 1056 aa26.9■■□□□ 1.9
TSPAN4-217ENST00000527644 DONSONQ9NYP3 566 aa26.9■■□□□ 1.9
TSPAN4-217ENST00000527644 TPX2Q9ULW0 747 aaKnown RBP26.9■■□□□ 1.9
TSPAN4-217ENST00000527644 ADAMTS9Q9P2N4 1935 aa26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 C10orf142B7Z368 130 aa26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 KDELR3O43731 214 aa26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 CD160O95971 181 aa26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 PRNPP04156 253 aa26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 CTSLP07711 333 aa26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 CCR5P51681 352 aa26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 AFF3P51826 1226 aaKnown RBP26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 TPI1P60174 286 aa26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 VSTM4Q8IW00 320 aa26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 MINDY1Q8N5J2 469 aa26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 ISG20Q96AZ6 181 aaKnown RBP26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 PEBP4Q96S96 227 aa26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 DHX35Q9H5Z1 703 aaKnown RBP26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 NOL6Q9H6R4 1146 aaKnown RBP26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 GPATCH2LQ9NWQ4 482 aa26.89■■□□□ 1.9
TSPAN4-217ENST00000527644 MED19A0JLT2 244 aaPredicted RBP26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 ZSCAN5CA6NGD5 496 aaPredicted RBP26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 OPHN1O60890 802 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 LRCH4O75427 683 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 TPM1P09493 284 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 PCK1P35558 622 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 CCDC15Q0P6D6 951 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 CNTN1Q12860 1018 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 GRIK2Q13002 908 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 CARD16Q5EG05 197 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 CCDC122Q5T0U0 273 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 DPY19L3Q6ZPD9 716 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 PLPP6Q8IY26 295 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 UMODL1-AS1Q8N2C9 162 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 CHST14Q8NCH0 376 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 DNAJC7Q99615 494 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 ORAI3Q9BRQ5 295 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 SNRNP25Q9BV90 132 aaKnown RBP26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 DNAAF2Q9NVR5 837 aaKnown RBP26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 IL36AQ9UHA7 158 aa26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 FCF1Q9Y324 198 aaKnown RBP26.88■■□□□ 1.89
TSPAN4-217ENST00000527644 TBC1D3DA0A087WVF3 549 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 TBC1D3IA0A087WXS9 549 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 TBC1D3EA0A087X179 549 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 TBC1D3KA0A087X1G2 549 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 A0A1W2PPC4 97 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 TBC1D3FA6NER0 549 aaPredicted RBP26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 TBC1D3LB9A6J9 549 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 EEF2KO00418 725 aaKnown RBP26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 PLK4O00444 970 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 PLRG1O43660 514 aaKnown RBP26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 CYP1A2P05177 515 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 TBC1D3HP0C7X1 549 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 PIGHQ14442 188 aaPredicted RBP26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 TEAD4Q15561 434 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 CA9Q16790 459 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 POM121L1PQ3SYA9 428 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 PARP15Q460N3 678 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 AGBL4Q5VU57 503 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 TBC1D3GQ6DHY5 549 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 TBC1D3CQ6IPX1 549 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 TBC1D3Q8IZP1 549 aaPredicted RBP26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 TM9SF3Q9HD45 589 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 ACTL7AQ9Y615 435 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 SLCO1B1Q9Y6L6 691 aa26.87■■□□□ 1.89
TSPAN4-217ENST00000527644 ASCC3Q8N3C0 2202 aaKnown RBP26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 RASA4BC9J798 803 aa26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 KPNA3O00505 521 aaPredicted RBP26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 RASA4O43374 803 aa26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 KCNK5O95279 499 aa26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 EIF4A3P38919 411 aaKnown RBP26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 CSNK1EP49674 416 aaKnown RBP26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 DNA2P51530 1060 aa26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 ZNF135P52742 658 aaPredicted RBP26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 TSR1Q2NL82 804 aaKnown RBP26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 ARSIQ5FYB1 569 aa26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 IL27RAQ6UWB1 636 aa26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 CYP4V2Q6ZWL3 525 aaPredicted RBP26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 ZNF354CQ86Y25 554 aa26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 HEPHQ9BQS7 1158 aa26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 DYRK4Q9NR20 520 aa26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 ZNHIT6Q9NWK9 470 aaKnown RBP26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 NENFQ9UMX5 172 aa26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 NCOR2Q9Y618 2525 aa26.86■■□□□ 1.89
TSPAN4-217ENST00000527644 UPK3BL1B0FP48 263 aa26.85■■□□□ 1.89
TSPAN4-217ENST00000527644 UPK3BL2E5RIL1 263 aa26.85■■□□□ 1.89
TSPAN4-217ENST00000527644 CSRP1P21291 193 aaKnown RBP26.85■■□□□ 1.89
TSPAN4-217ENST00000527644 GRIA4P48058 902 aa26.85■■□□□ 1.89
TSPAN4-217ENST00000527644 OR2I1PQ8NGU4 316 aa26.85■■□□□ 1.89
TSPAN4-217ENST00000527644 CASKIN2Q8WXE0 1202 aa26.85■■□□□ 1.89
TSPAN4-217ENST00000527644 HMCESQ96FZ2 354 aa26.85■■□□□ 1.89
TSPAN4-217ENST00000527644 KCTD15Q96SI1 283 aaPredicted RBP26.85■■□□□ 1.89
TSPAN4-217ENST00000527644 NUP85Q9BW27 656 aa26.85■■□□□ 1.89
TSPAN4-217ENST00000527644 IP6K2Q9UHH9 426 aa26.85■■□□□ 1.89
TSPAN4-217ENST00000527644 WASF2Q9Y6W5 498 aa26.85■■□□□ 1.89
TSPAN4-217ENST00000527644 A0A1B0GVT2 93 aa26.84■■□□□ 1.89
TSPAN4-217ENST00000527644 DAPK3O43293 454 aa26.84■■□□□ 1.89
TSPAN4-217ENST00000527644 BUB1O43683 1085 aa26.84■■□□□ 1.89
TSPAN4-217ENST00000527644 LEFTY1O75610 366 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms