RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 MTSS1O43312 755 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 SMAD6O43541 496 aaKnown RBP16.82■□□□□ 0.28
CAPN1-205ENST00000526954 ZNF821O75541 412 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-205ENST00000526954 TMCC1O94876 653 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 CCNB1P14635 433 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 NTSR1P30989 418 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 IL12RB1P42701 662 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 PAFAH1B1P43034 410 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 ATP5OP48047 213 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 RENBPP51606 427 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 LBRQ14739 615 aaKnown RBP16.82■□□□□ 0.28
CAPN1-205ENST00000526954 CYTH1Q15438 398 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 DLG2Q15700 870 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 C2orf27AQ580R0 203 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 SERPINA13PQ6UXR4 307 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 LEKR1Q6ZMV7 388 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 CDKL3Q8IVW4 592 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-205ENST00000526954 PLPP6Q8IY26 295 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 CHPFQ8IZ52 775 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 ALLCQ8N6M5 410 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 PRELID2Q8N945 189 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 RPLP0P6Q8NHW5 317 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 FRS2Q8WU20 508 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 LRRN4Q8WUT4 740 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 C1orf54Q8WWF1 131 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 ATG4AQ8WYN0 398 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 CAPZA3Q96KX2 299 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 IL12RB2Q99665 862 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 FAM118BQ9BPY3 351 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 COL25A1Q9BXS0 654 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-205ENST00000526954 CHRDQ9H2X0 955 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 USP29Q9HBJ7 922 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 SMARCAL1Q9NZC9 954 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 SUN2Q9UH99 717 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 AMACRQ9UHK6 382 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 CDC23Q9UJX2 597 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 SLC8A2Q9UPR5 921 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 DRG1Q9Y295 367 aaKnown RBP16.82■□□□□ 0.28
CAPN1-205ENST00000526954 STON1Q9Y6Q2 735 aa16.82■□□□□ 0.28
CAPN1-205ENST00000526954 TTC34A8MYJ7 566 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 PDE2AO00408 941 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-205ENST00000526954 KRIT1O00522 736 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 ADAM23O75077 832 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 URI1O94763 535 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-205ENST00000526954 KLF8O95600 359 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-205ENST00000526954 PDGFBP01127 241 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-205ENST00000526954 VAV1P15498 845 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 MAGEA9P43362 315 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 CLCN5P51795 746 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 SLC10A7Q0GE19 358 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 BYSLQ13895 437 aaKnown RBP16.81■□□□□ 0.28
CAPN1-205ENST00000526954 OASLQ15646 514 aaKnown RBP16.81■□□□□ 0.28
CAPN1-205ENST00000526954 HNRNPA1L2Q32P51 320 aaKnown RBP16.81■□□□□ 0.28
CAPN1-205ENST00000526954 MARC1Q5VT66 337 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 SDE2Q6IQ49 451 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 C22orf39Q6P5X5 142 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 DARS2Q6PI48 645 aaKnown RBP16.81■□□□□ 0.28
CAPN1-205ENST00000526954 Q6ZS52 159 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 BMP8AQ7Z5Y6 402 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 PCDH20Q8N6Y1 951 aaKnown RBP16.81■□□□□ 0.28
CAPN1-205ENST00000526954 C12orf50Q8NA57 414 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-205ENST00000526954 FLCNQ8NFG4 579 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 HTR3CQ8WXA8 447 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 PTPRN2Q92932 1015 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 PSKH2Q96QS6 385 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 IER2Q9BTL4 223 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 ZDHHC4Q9NPG8 344 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 CACNA2D2Q9NY47 1150 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 SEPT3Q9UH03 358 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 MMP17Q9ULZ9 603 aa16.81■□□□□ 0.28
CAPN1-205ENST00000526954 GOLGA6L10A0A0M3HER8 536 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 TARSL2A2RTX5 802 aaKnown RBP16.8■□□□□ 0.28
CAPN1-205ENST00000526954 CFAP69A5D8W1 941 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 WASH3PC4AMC7 463 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 KCNK1O00180 336 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 ATG13O75143 517 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 ITGAVP06756 1048 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 AOC1P19801 751 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 PRKCHP24723 683 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 RBL1P28749 1068 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 STIP1P31948 543 aaKnown RBP16.8■□□□□ 0.28
CAPN1-205ENST00000526954 HSPA9P38646 679 aaKnown RBP16.8■□□□□ 0.28
CAPN1-205ENST00000526954 MMP13P45452 471 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 NSUN2Q08J23 767 aaKnown RBP eCLIP16.8■□□□□ 0.28
CAPN1-205ENST00000526954 GAS6Q14393 721 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 ACCSLQ4AC99 568 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 EOGTQ5NDL2 527 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 HEATR6Q6AI08 1181 aaKnown RBP16.8■□□□□ 0.28
CAPN1-205ENST00000526954 B4GALNT4Q76KP1 1039 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 BBS5Q8N3I7 341 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 TXNDC5Q8NBS9 432 aaKnown RBP16.8■□□□□ 0.28
CAPN1-205ENST00000526954 VAT1Q99536 393 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 FERMT1Q9BQL6 677 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 CINPQ9BW66 212 aaPredicted RBP16.8■□□□□ 0.28
CAPN1-205ENST00000526954 AP1M1Q9BXS5 423 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 DLGAP2Q9P1A6 1054 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 FCF1Q9Y324 198 aaKnown RBP16.8■□□□□ 0.28
CAPN1-205ENST00000526954 MUC3AQ02505 3323 aa16.8■□□□□ 0.28
CAPN1-205ENST00000526954 EDDM13A0A1B0GTR0 161 aa16.79■□□□□ 0.28
CAPN1-205ENST00000526954 SGK1O00141 431 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms